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RefShannon: A genome-guided transcriptome assembler using sparse flow decomposition

High throughput sequencing of RNA (RNA-Seq) has become a staple in modern molecular biology, with applications not only in quantifying gene expression but also in isoform-level analysis of the RNA transcripts. To enable such an isoform-level analysis, a transcriptome assembly algorithm is utilized t...

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Detalles Bibliográficos
Autores principales: Mao, Shunfu, Pachter, Lior, Tse, David, Kannan, Sreeram
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7266320/
https://www.ncbi.nlm.nih.gov/pubmed/32484809
http://dx.doi.org/10.1371/journal.pone.0232946