Cargando…
RefShannon: A genome-guided transcriptome assembler using sparse flow decomposition
High throughput sequencing of RNA (RNA-Seq) has become a staple in modern molecular biology, with applications not only in quantifying gene expression but also in isoform-level analysis of the RNA transcripts. To enable such an isoform-level analysis, a transcriptome assembly algorithm is utilized t...
Autores principales: | Mao, Shunfu, Pachter, Lior, Tse, David, Kannan, Sreeram |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7266320/ https://www.ncbi.nlm.nih.gov/pubmed/32484809 http://dx.doi.org/10.1371/journal.pone.0232946 |
Ejemplares similares
-
BOAssembler: A Bayesian Optimization Framework to Improve RNA-Seq Assembly Performance
por: Mao, Shunfu, et al.
Publicado: (2020) -
Sparse Tensor Decomposition for Haplotype Assembly of Diploids and Polyploids
por: Hashemi, Abolfazl, et al.
Publicado: (2018) -
CellMeSH: probabilistic cell-type identification using indexed literature
por: Mao, Shunfu, et al.
Publicado: (2021) -
Tensor Decomposition for Spatial—Temporal Traffic Flow Prediction with Sparse Data
por: Yang, Funing, et al.
Publicado: (2020) -
A Decomposition Method for Global Evaluation of Shannon Entropy and Local Estimations of Algorithmic Complexity
por: Zenil, Hector, et al.
Publicado: (2018)