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Trypsin cleavage sites are highly unlikely to occur in celiac-causing restricted epitopes
To assess risk, the European Food Safety Authority requires that the amino-acid sequences of newly expressed proteins in genetically engineered (GE) crops should be searched for partial matches with 9-mer restricted epitopes known to cause celiac disease. None of the 26 known celiac-causing 9-mer ep...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7289517/ https://www.ncbi.nlm.nih.gov/pubmed/31743058 http://dx.doi.org/10.1080/21645698.2019.1692612 |
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author | Herman, Rod A. Song, Ping Mirsky, Henry P. |
author_facet | Herman, Rod A. Song, Ping Mirsky, Henry P. |
author_sort | Herman, Rod A. |
collection | PubMed |
description | To assess risk, the European Food Safety Authority requires that the amino-acid sequences of newly expressed proteins in genetically engineered (GE) crops should be searched for partial matches with 9-mer restricted epitopes known to cause celiac disease. None of the 26 known celiac-causing 9-mer epitopes contain an in-silico predicted trypsin cleavage site. The probability of this occurring by chance alone is 0.000056. Based on the absence of in-silico predicted trypsin cleavage sites within 9-mer epitopes known to cause celiac disease, it can be concluded with very high confidence that true celiac-causing epitopes are highly unlikely to contain in-silico predicted trypsin cleavage sites and that this criterion can reliably be used to exclude the risk that imperfect 9-mer peptide matches within newly expressed proteins from GE crops cause celiac disease. |
format | Online Article Text |
id | pubmed-7289517 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-72895172020-11-19 Trypsin cleavage sites are highly unlikely to occur in celiac-causing restricted epitopes Herman, Rod A. Song, Ping Mirsky, Henry P. GM Crops Food Commentary To assess risk, the European Food Safety Authority requires that the amino-acid sequences of newly expressed proteins in genetically engineered (GE) crops should be searched for partial matches with 9-mer restricted epitopes known to cause celiac disease. None of the 26 known celiac-causing 9-mer epitopes contain an in-silico predicted trypsin cleavage site. The probability of this occurring by chance alone is 0.000056. Based on the absence of in-silico predicted trypsin cleavage sites within 9-mer epitopes known to cause celiac disease, it can be concluded with very high confidence that true celiac-causing epitopes are highly unlikely to contain in-silico predicted trypsin cleavage sites and that this criterion can reliably be used to exclude the risk that imperfect 9-mer peptide matches within newly expressed proteins from GE crops cause celiac disease. Taylor & Francis 2019-11-19 /pmc/articles/PMC7289517/ /pubmed/31743058 http://dx.doi.org/10.1080/21645698.2019.1692612 Text en © 2019 The Author(s). Published with license by Taylor & Francis Group, LLC. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivatives License (http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) ), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited, and is not altered, transformed, or built upon in any way. |
spellingShingle | Commentary Herman, Rod A. Song, Ping Mirsky, Henry P. Trypsin cleavage sites are highly unlikely to occur in celiac-causing restricted epitopes |
title | Trypsin cleavage sites are highly unlikely to occur in celiac-causing restricted epitopes |
title_full | Trypsin cleavage sites are highly unlikely to occur in celiac-causing restricted epitopes |
title_fullStr | Trypsin cleavage sites are highly unlikely to occur in celiac-causing restricted epitopes |
title_full_unstemmed | Trypsin cleavage sites are highly unlikely to occur in celiac-causing restricted epitopes |
title_short | Trypsin cleavage sites are highly unlikely to occur in celiac-causing restricted epitopes |
title_sort | trypsin cleavage sites are highly unlikely to occur in celiac-causing restricted epitopes |
topic | Commentary |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7289517/ https://www.ncbi.nlm.nih.gov/pubmed/31743058 http://dx.doi.org/10.1080/21645698.2019.1692612 |
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