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N-terminal deletion of Swi3 created by the deletion of a dubious ORF YJL175W mitigates protein burden effect in S. cerevisiae

Extreme overproduction of gratuitous proteins can overload cellular protein production resources, leading to growth defects, a phenomenon known as the protein burden/cost effect. Genetic screening in the budding yeast Saccharomyces cerevisiae has isolated several dubious ORFs whose deletions mitigat...

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Autores principales: Saeki, Nozomu, Eguchi, Yuichi, Kintaka, Reiko, Makanae, Koji, Shichino, Yuichi, Iwasaki, Shintaro, Kanno, Manabu, Kimura, Nobutada, Moriya, Hisao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7289859/
https://www.ncbi.nlm.nih.gov/pubmed/32528012
http://dx.doi.org/10.1038/s41598-020-66307-z
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author Saeki, Nozomu
Eguchi, Yuichi
Kintaka, Reiko
Makanae, Koji
Shichino, Yuichi
Iwasaki, Shintaro
Kanno, Manabu
Kimura, Nobutada
Moriya, Hisao
author_facet Saeki, Nozomu
Eguchi, Yuichi
Kintaka, Reiko
Makanae, Koji
Shichino, Yuichi
Iwasaki, Shintaro
Kanno, Manabu
Kimura, Nobutada
Moriya, Hisao
author_sort Saeki, Nozomu
collection PubMed
description Extreme overproduction of gratuitous proteins can overload cellular protein production resources, leading to growth defects, a phenomenon known as the protein burden/cost effect. Genetic screening in the budding yeast Saccharomyces cerevisiae has isolated several dubious ORFs whose deletions mitigated the protein burden effect, but individual characterization thereof has yet to be delineated. We found that deletion of the YJL175W ORF yielded an N-terminal deletion of Swi3, a subunit of the SWI/SNF chromatin remodeling complex, and partial loss of function of Swi3. The deletion mutant showed a reduction in transcription of genes encoding highly expressed, secreted proteins and an overall reduction in translation. Mutations in the chromatin remodeling complex could thus mitigate the protein burden effect, likely by reallocating residual cellular resources used to overproduce proteins. This cellular state might also be related to cancer cells, as they frequently harbor mutations in the SWI/SNF complex.
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spelling pubmed-72898592020-06-15 N-terminal deletion of Swi3 created by the deletion of a dubious ORF YJL175W mitigates protein burden effect in S. cerevisiae Saeki, Nozomu Eguchi, Yuichi Kintaka, Reiko Makanae, Koji Shichino, Yuichi Iwasaki, Shintaro Kanno, Manabu Kimura, Nobutada Moriya, Hisao Sci Rep Article Extreme overproduction of gratuitous proteins can overload cellular protein production resources, leading to growth defects, a phenomenon known as the protein burden/cost effect. Genetic screening in the budding yeast Saccharomyces cerevisiae has isolated several dubious ORFs whose deletions mitigated the protein burden effect, but individual characterization thereof has yet to be delineated. We found that deletion of the YJL175W ORF yielded an N-terminal deletion of Swi3, a subunit of the SWI/SNF chromatin remodeling complex, and partial loss of function of Swi3. The deletion mutant showed a reduction in transcription of genes encoding highly expressed, secreted proteins and an overall reduction in translation. Mutations in the chromatin remodeling complex could thus mitigate the protein burden effect, likely by reallocating residual cellular resources used to overproduce proteins. This cellular state might also be related to cancer cells, as they frequently harbor mutations in the SWI/SNF complex. Nature Publishing Group UK 2020-06-11 /pmc/articles/PMC7289859/ /pubmed/32528012 http://dx.doi.org/10.1038/s41598-020-66307-z Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Saeki, Nozomu
Eguchi, Yuichi
Kintaka, Reiko
Makanae, Koji
Shichino, Yuichi
Iwasaki, Shintaro
Kanno, Manabu
Kimura, Nobutada
Moriya, Hisao
N-terminal deletion of Swi3 created by the deletion of a dubious ORF YJL175W mitigates protein burden effect in S. cerevisiae
title N-terminal deletion of Swi3 created by the deletion of a dubious ORF YJL175W mitigates protein burden effect in S. cerevisiae
title_full N-terminal deletion of Swi3 created by the deletion of a dubious ORF YJL175W mitigates protein burden effect in S. cerevisiae
title_fullStr N-terminal deletion of Swi3 created by the deletion of a dubious ORF YJL175W mitigates protein burden effect in S. cerevisiae
title_full_unstemmed N-terminal deletion of Swi3 created by the deletion of a dubious ORF YJL175W mitigates protein burden effect in S. cerevisiae
title_short N-terminal deletion of Swi3 created by the deletion of a dubious ORF YJL175W mitigates protein burden effect in S. cerevisiae
title_sort n-terminal deletion of swi3 created by the deletion of a dubious orf yjl175w mitigates protein burden effect in s. cerevisiae
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7289859/
https://www.ncbi.nlm.nih.gov/pubmed/32528012
http://dx.doi.org/10.1038/s41598-020-66307-z
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