Construction of habitat-specific training sets to achieve species-level assignment in 16S rRNA gene datasets

BACKGROUND: The low cost of 16S rRNA gene sequencing facilitates population-scale molecular epidemiological studies. Existing computational algorithms can resolve 16S rRNA gene sequences into high-resolution amplicon sequence variants (ASVs), which represent consistent labels comparable across studi...

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Detalles Bibliográficos
Autores principales: F. Escapa, Isabel, Huang, Yanmei, Chen, Tsute, Lin, Maoxuan, Kokaras, Alexis, Dewhirst, Floyd E., Lemon, Katherine P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Methodology
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7291764/
https://www.ncbi.nlm.nih.gov/pubmed/32414415
http://dx.doi.org/10.1186/s40168-020-00841-w

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7291764/
https://www.ncbi.nlm.nih.gov/pubmed/32414415
http://dx.doi.org/10.1186/s40168-020-00841-w

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