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Contrasting Community Composition of Active Microbial Eukaryotes in Melt Ponds and Sea Water of the Arctic Ocean Revealed by High Throughput Sequencing

Melt ponds (MPs), form as the result of thawing of snow and sea ice in the summer, have lower albedo than the sea ice and are thus partly responsible for the polar amplification of global warming. Knowing the community composition of MP organisms is key to understanding their roles in the biogeochem...

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Autores principales: Xu, Dapeng, Kong, Hejun, Yang, Eun-Jin, Li, Xinran, Jiao, Nianzhi, Warren, Alan, Wang, Ying, Lee, Youngju, Jung, Jinyoung, Kang, Sung-Ho
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7291953/
https://www.ncbi.nlm.nih.gov/pubmed/32582106
http://dx.doi.org/10.3389/fmicb.2020.01170
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author Xu, Dapeng
Kong, Hejun
Yang, Eun-Jin
Li, Xinran
Jiao, Nianzhi
Warren, Alan
Wang, Ying
Lee, Youngju
Jung, Jinyoung
Kang, Sung-Ho
author_facet Xu, Dapeng
Kong, Hejun
Yang, Eun-Jin
Li, Xinran
Jiao, Nianzhi
Warren, Alan
Wang, Ying
Lee, Youngju
Jung, Jinyoung
Kang, Sung-Ho
author_sort Xu, Dapeng
collection PubMed
description Melt ponds (MPs), form as the result of thawing of snow and sea ice in the summer, have lower albedo than the sea ice and are thus partly responsible for the polar amplification of global warming. Knowing the community composition of MP organisms is key to understanding their roles in the biogeochemical cycles of nutrients and elements. However, the community composition of MP microbial eukaryotes has rarely been studied. In the present study, we assessed the microbial eukaryote biodiversity, community composition, and assembly processes in MPs and surface sea water (SW) using high throughput sequencing of 18S rRNA of size-fractionated samples. Alpha diversity estimates were lower in the MPs than SW across all size fractions. The community composition of MPs was significantly different from that of SW. The MP communities were dominated by members from Chrysophyceae, the ciliate classes Litostomatea and Spirotrichea, and the cercozoan groups Filosa-Thecofilosea. One open MP community was similar to SW communities, which was probably due to the advanced stage of development of the MP enabling the exchange of species between it and adjacent SW. High portions of shared species between MPs and SW may indicate the vigorous exchange of species between these two major types of environments in the Arctic Ocean. SW microbial eukaryote communities are mainly controlled by dispersal limitation whereas those of MP are mainly controlled by ecological drift.
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spelling pubmed-72919532020-06-23 Contrasting Community Composition of Active Microbial Eukaryotes in Melt Ponds and Sea Water of the Arctic Ocean Revealed by High Throughput Sequencing Xu, Dapeng Kong, Hejun Yang, Eun-Jin Li, Xinran Jiao, Nianzhi Warren, Alan Wang, Ying Lee, Youngju Jung, Jinyoung Kang, Sung-Ho Front Microbiol Microbiology Melt ponds (MPs), form as the result of thawing of snow and sea ice in the summer, have lower albedo than the sea ice and are thus partly responsible for the polar amplification of global warming. Knowing the community composition of MP organisms is key to understanding their roles in the biogeochemical cycles of nutrients and elements. However, the community composition of MP microbial eukaryotes has rarely been studied. In the present study, we assessed the microbial eukaryote biodiversity, community composition, and assembly processes in MPs and surface sea water (SW) using high throughput sequencing of 18S rRNA of size-fractionated samples. Alpha diversity estimates were lower in the MPs than SW across all size fractions. The community composition of MPs was significantly different from that of SW. The MP communities were dominated by members from Chrysophyceae, the ciliate classes Litostomatea and Spirotrichea, and the cercozoan groups Filosa-Thecofilosea. One open MP community was similar to SW communities, which was probably due to the advanced stage of development of the MP enabling the exchange of species between it and adjacent SW. High portions of shared species between MPs and SW may indicate the vigorous exchange of species between these two major types of environments in the Arctic Ocean. SW microbial eukaryote communities are mainly controlled by dispersal limitation whereas those of MP are mainly controlled by ecological drift. Frontiers Media S.A. 2020-06-03 /pmc/articles/PMC7291953/ /pubmed/32582106 http://dx.doi.org/10.3389/fmicb.2020.01170 Text en Copyright © 2020 Xu, Kong, Yang, Li, Jiao, Warren, Wang, Lee, Jung and Kang. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Xu, Dapeng
Kong, Hejun
Yang, Eun-Jin
Li, Xinran
Jiao, Nianzhi
Warren, Alan
Wang, Ying
Lee, Youngju
Jung, Jinyoung
Kang, Sung-Ho
Contrasting Community Composition of Active Microbial Eukaryotes in Melt Ponds and Sea Water of the Arctic Ocean Revealed by High Throughput Sequencing
title Contrasting Community Composition of Active Microbial Eukaryotes in Melt Ponds and Sea Water of the Arctic Ocean Revealed by High Throughput Sequencing
title_full Contrasting Community Composition of Active Microbial Eukaryotes in Melt Ponds and Sea Water of the Arctic Ocean Revealed by High Throughput Sequencing
title_fullStr Contrasting Community Composition of Active Microbial Eukaryotes in Melt Ponds and Sea Water of the Arctic Ocean Revealed by High Throughput Sequencing
title_full_unstemmed Contrasting Community Composition of Active Microbial Eukaryotes in Melt Ponds and Sea Water of the Arctic Ocean Revealed by High Throughput Sequencing
title_short Contrasting Community Composition of Active Microbial Eukaryotes in Melt Ponds and Sea Water of the Arctic Ocean Revealed by High Throughput Sequencing
title_sort contrasting community composition of active microbial eukaryotes in melt ponds and sea water of the arctic ocean revealed by high throughput sequencing
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7291953/
https://www.ncbi.nlm.nih.gov/pubmed/32582106
http://dx.doi.org/10.3389/fmicb.2020.01170
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