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MACPET: model-based analysis for ChIA-PET

We present model-based analysis for ChIA-PET (MACPET), which analyzes paired-end read sequences provided by ChIA-PET for finding binding sites of a protein of interest. MACPET uses information from both tags of each PET and searches for binding sites in a two-dimensional space, while taking into acc...

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Detalles Bibliográficos
Autores principales: Vardaxis, Ioannis, Drabløs, Finn, Rye, Morten B, Lindqvist, Bo Henry
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7308020/
https://www.ncbi.nlm.nih.gov/pubmed/30698663
http://dx.doi.org/10.1093/biostatistics/kxy084