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Fast analysis of scATAC-seq data using a predefined set of genomic regions

Background: Analysis of scATAC-seq data has been recently scaled to thousands of cells. While processing of other types of single cell data was boosted by the implementation of alignment-free techniques, pipelines available to process scATAC-seq data still require large computational resources. We p...

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Detalles Bibliográficos
Autores principales: Giansanti, Valentina, Tang, Ming, Cittaro, Davide
Formato: Online Artículo Texto
Lenguaje:English
Publicado: F1000 Research Limited 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7308914/
https://www.ncbi.nlm.nih.gov/pubmed/32595951
http://dx.doi.org/10.12688/f1000research.22731.2