FSBC: fast string-based clustering for HT-SELEX data

BACKGROUND: The combination of systematic evolution of ligands by exponential enrichment (SELEX) and deep sequencing is termed high-throughput (HT)-SELEX, which enables searching aptamer candidates from a massive amount of oligonucleotide sequences. A clustering method is an important procedure to i...

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Detalles Bibliográficos
Autores principales: Kato, Shintaro, Ono, Takayoshi, Minagawa, Hirotaka, Horii, Katsunori, Shiratori, Ikuo, Waga, Iwao, Ito, Koichi, Aoki, Takafumi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Methodology Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7313139/
https://www.ncbi.nlm.nih.gov/pubmed/32580745
http://dx.doi.org/10.1186/s12859-020-03607-1

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7313139/
https://www.ncbi.nlm.nih.gov/pubmed/32580745
http://dx.doi.org/10.1186/s12859-020-03607-1

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