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Using Machine Learning Methods and Structural Alerts for Prediction of Mitochondrial Toxicity

Over the last few years more and more organ and idiosyncratic toxicities were linked to mitochondrial toxicity. Despite well‐established assays, such as the seahorse and Glucose/Galactose assay, an in silico approach to mitochondrial toxicity is still feasible, particularly when it comes to the asse...

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Autores principales: Hemmerich, Jennifer, Troger, Florentina, Füzi, Barbara, F.Ecker, Gerhard
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7317375/
https://www.ncbi.nlm.nih.gov/pubmed/32108997
http://dx.doi.org/10.1002/minf.202000005
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author Hemmerich, Jennifer
Troger, Florentina
Füzi, Barbara
F.Ecker, Gerhard
author_facet Hemmerich, Jennifer
Troger, Florentina
Füzi, Barbara
F.Ecker, Gerhard
author_sort Hemmerich, Jennifer
collection PubMed
description Over the last few years more and more organ and idiosyncratic toxicities were linked to mitochondrial toxicity. Despite well‐established assays, such as the seahorse and Glucose/Galactose assay, an in silico approach to mitochondrial toxicity is still feasible, particularly when it comes to the assessment of large compound libraries. Therefore, in silico approaches could be very beneficial to indicate hazards early in the drug development pipeline. By combining multiple endpoints, we derived the largest so far published dataset on mitochondrial toxicity. A thorough data analysis shows that molecules causing mitochondrial toxicity can be distinguished by physicochemical properties. Finally, the combination of machine learning and structural alerts highlights the suitability for in silico risk assessment of mitochondrial toxicity.
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spelling pubmed-73173752020-06-30 Using Machine Learning Methods and Structural Alerts for Prediction of Mitochondrial Toxicity Hemmerich, Jennifer Troger, Florentina Füzi, Barbara F.Ecker, Gerhard Mol Inform Full Papers Over the last few years more and more organ and idiosyncratic toxicities were linked to mitochondrial toxicity. Despite well‐established assays, such as the seahorse and Glucose/Galactose assay, an in silico approach to mitochondrial toxicity is still feasible, particularly when it comes to the assessment of large compound libraries. Therefore, in silico approaches could be very beneficial to indicate hazards early in the drug development pipeline. By combining multiple endpoints, we derived the largest so far published dataset on mitochondrial toxicity. A thorough data analysis shows that molecules causing mitochondrial toxicity can be distinguished by physicochemical properties. Finally, the combination of machine learning and structural alerts highlights the suitability for in silico risk assessment of mitochondrial toxicity. John Wiley and Sons Inc. 2020-03-23 2020-05 /pmc/articles/PMC7317375/ /pubmed/32108997 http://dx.doi.org/10.1002/minf.202000005 Text en © 2020 The Authors. Published by Wiley-VCH Verlag GmbH & Co. KGaA. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Full Papers
Hemmerich, Jennifer
Troger, Florentina
Füzi, Barbara
F.Ecker, Gerhard
Using Machine Learning Methods and Structural Alerts for Prediction of Mitochondrial Toxicity
title Using Machine Learning Methods and Structural Alerts for Prediction of Mitochondrial Toxicity
title_full Using Machine Learning Methods and Structural Alerts for Prediction of Mitochondrial Toxicity
title_fullStr Using Machine Learning Methods and Structural Alerts for Prediction of Mitochondrial Toxicity
title_full_unstemmed Using Machine Learning Methods and Structural Alerts for Prediction of Mitochondrial Toxicity
title_short Using Machine Learning Methods and Structural Alerts for Prediction of Mitochondrial Toxicity
title_sort using machine learning methods and structural alerts for prediction of mitochondrial toxicity
topic Full Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7317375/
https://www.ncbi.nlm.nih.gov/pubmed/32108997
http://dx.doi.org/10.1002/minf.202000005
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