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Reconstituted cell-free protein synthesis using in vitro transcribed tRNAs

Entire reconstitution of tRNAs for active protein production in a cell-free system brings flexibility into the genetic code engineering. It can also contribute to the field of cell-free synthetic biology, which aims to construct self-replicable artificial cells. Herein, we developed a system equippe...

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Autores principales: Hibi, Keita, Amikura, Kazuaki, Sugiura, Naoki, Masuda, Keiko, Ohno, Satoshi, Yokogawa, Takashi, Ueda, Takuya, Shimizu, Yoshihiro
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7334211/
https://www.ncbi.nlm.nih.gov/pubmed/32620935
http://dx.doi.org/10.1038/s42003-020-1074-2
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author Hibi, Keita
Amikura, Kazuaki
Sugiura, Naoki
Masuda, Keiko
Ohno, Satoshi
Yokogawa, Takashi
Ueda, Takuya
Shimizu, Yoshihiro
author_facet Hibi, Keita
Amikura, Kazuaki
Sugiura, Naoki
Masuda, Keiko
Ohno, Satoshi
Yokogawa, Takashi
Ueda, Takuya
Shimizu, Yoshihiro
author_sort Hibi, Keita
collection PubMed
description Entire reconstitution of tRNAs for active protein production in a cell-free system brings flexibility into the genetic code engineering. It can also contribute to the field of cell-free synthetic biology, which aims to construct self-replicable artificial cells. Herein, we developed a system equipped only with in vitro transcribed tRNA (iVTtRNA) based on a reconstituted cell-free protein synthesis (PURE) system. The developed system, consisting of 21 iVTtRNAs without nucleotide modifications, is able to synthesize active proteins according to the redesigned genetic code. Manipulation of iVTtRNA composition in the system enabled genetic code rewriting. Introduction of modified nucleotides into specific iVTtRNAs demonstrated to be effective for both protein yield and decoding fidelity, where the production yield of DHFR reached about 40% of the reaction with native tRNA at 30°C. The developed system will prove useful for studying decoding processes, and may be employed in genetic code and protein engineering applications.
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spelling pubmed-73342112020-07-09 Reconstituted cell-free protein synthesis using in vitro transcribed tRNAs Hibi, Keita Amikura, Kazuaki Sugiura, Naoki Masuda, Keiko Ohno, Satoshi Yokogawa, Takashi Ueda, Takuya Shimizu, Yoshihiro Commun Biol Article Entire reconstitution of tRNAs for active protein production in a cell-free system brings flexibility into the genetic code engineering. It can also contribute to the field of cell-free synthetic biology, which aims to construct self-replicable artificial cells. Herein, we developed a system equipped only with in vitro transcribed tRNA (iVTtRNA) based on a reconstituted cell-free protein synthesis (PURE) system. The developed system, consisting of 21 iVTtRNAs without nucleotide modifications, is able to synthesize active proteins according to the redesigned genetic code. Manipulation of iVTtRNA composition in the system enabled genetic code rewriting. Introduction of modified nucleotides into specific iVTtRNAs demonstrated to be effective for both protein yield and decoding fidelity, where the production yield of DHFR reached about 40% of the reaction with native tRNA at 30°C. The developed system will prove useful for studying decoding processes, and may be employed in genetic code and protein engineering applications. Nature Publishing Group UK 2020-07-03 /pmc/articles/PMC7334211/ /pubmed/32620935 http://dx.doi.org/10.1038/s42003-020-1074-2 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Hibi, Keita
Amikura, Kazuaki
Sugiura, Naoki
Masuda, Keiko
Ohno, Satoshi
Yokogawa, Takashi
Ueda, Takuya
Shimizu, Yoshihiro
Reconstituted cell-free protein synthesis using in vitro transcribed tRNAs
title Reconstituted cell-free protein synthesis using in vitro transcribed tRNAs
title_full Reconstituted cell-free protein synthesis using in vitro transcribed tRNAs
title_fullStr Reconstituted cell-free protein synthesis using in vitro transcribed tRNAs
title_full_unstemmed Reconstituted cell-free protein synthesis using in vitro transcribed tRNAs
title_short Reconstituted cell-free protein synthesis using in vitro transcribed tRNAs
title_sort reconstituted cell-free protein synthesis using in vitro transcribed trnas
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7334211/
https://www.ncbi.nlm.nih.gov/pubmed/32620935
http://dx.doi.org/10.1038/s42003-020-1074-2
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