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Evaluation of variant calling for cpn60 barcode sequence-based microbiome profiling

Amplification and sequencing of conserved genetic barcodes such as the cpn60 gene is a common approach to determining the taxonomic composition of microbiomes. Exact sequence variant calling has been proposed as an alternative to previously established methods for aggregation of sequence reads into...

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Detalles Bibliográficos
Autores principales: Vancuren, Sarah J., Dos Santos, Scott J., Hill, Janet E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7347135/
https://www.ncbi.nlm.nih.gov/pubmed/32645030
http://dx.doi.org/10.1371/journal.pone.0235682