ganon: precise metagenomics classification against large and up-to-date sets of reference sequences

MOTIVATION: The exponential growth of assembled genome sequences greatly benefits metagenomics studies. However, currently available methods struggle to manage the increasing amount of sequences and their frequent updates. Indexing the current RefSeq can take days and hundreds of GB of memory on lar...

Descripción completa

Detalles Bibliográficos
Autores principales: Piro, Vitor C, Dadi, Temesgen H, Seiler, Enrico, Reinert, Knut, Renard, Bernhard Y
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Bioinformatics of Microbes and Microbiomes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7355301/
https://www.ncbi.nlm.nih.gov/pubmed/32657362
http://dx.doi.org/10.1093/bioinformatics/btaa458

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7355301/
https://www.ncbi.nlm.nih.gov/pubmed/32657362
http://dx.doi.org/10.1093/bioinformatics/btaa458

Ejemplares similares