Producing polished prokaryotic pangenomes with the Panaroo pipeline

Population-level comparisons of prokaryotic genomes must take into account the substantial differences in gene content resulting from horizontal gene transfer, gene duplication and gene loss. However, the automated annotation of prokaryotic genomes is imperfect, and errors due to fragmented assembli...

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Detalles Bibliográficos
Autores principales: Tonkin-Hill, Gerry, MacAlasdair, Neil, Ruis, Christopher, Weimann, Aaron, Horesh, Gal, Lees, John A., Gladstone, Rebecca A., Lo, Stephanie, Beaudoin, Christopher, Floto, R. Andres, Frost, Simon D.W., Corander, Jukka, Bentley, Stephen D., Parkhill, Julian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7376924/
https://www.ncbi.nlm.nih.gov/pubmed/32698896
http://dx.doi.org/10.1186/s13059-020-02090-4

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7376924/
https://www.ncbi.nlm.nih.gov/pubmed/32698896
http://dx.doi.org/10.1186/s13059-020-02090-4

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