instaGRAAL: chromosome-level quality scaffolding of genomes using a proximity ligation-based scaffolder

Hi-C exploits contact frequencies between pairs of loci to bridge and order contigs during genome assembly, resulting in chromosome-level assemblies. Because few robust programs are available for this type of data, we developed instaGRAAL, a complete overhaul of the GRAAL program, which has adapted...

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Detalles Bibliográficos
Autores principales: Baudry, Lyam, Guiglielmoni, Nadège, Marie-Nelly, Hervé, Cormier, Alexandre, Marbouty, Martial, Avia, Komlan, Mie, Yann Loe, Godfroy, Olivier, Sterck, Lieven, Cock, J. Mark, Zimmer, Christophe, Coelho, Susana M., Koszul, Romain
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7386250/
https://www.ncbi.nlm.nih.gov/pubmed/32552806
http://dx.doi.org/10.1186/s13059-020-02041-z

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7386250/
https://www.ncbi.nlm.nih.gov/pubmed/32552806
http://dx.doi.org/10.1186/s13059-020-02041-z

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