Detecting sample swaps in diverse NGS data types using linkage disequilibrium

As the number of genomics datasets grows rapidly, sample mislabeling has become a high stakes issue. We present CrosscheckFingerprints (Crosscheck), a tool for quantifying sample-relatedness and detecting incorrectly paired sequencing datasets from different donors. Crosscheck outperforms similar me...

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Detalles Bibliográficos
Autores principales: Javed, Nauman, Farjoun, Yossi, Fennell, Tim J., Epstein, Charles B., Bernstein, Bradley E., Shoresh, Noam
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7391710/
https://www.ncbi.nlm.nih.gov/pubmed/32728101
http://dx.doi.org/10.1038/s41467-020-17453-5

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7391710/
https://www.ncbi.nlm.nih.gov/pubmed/32728101
http://dx.doi.org/10.1038/s41467-020-17453-5

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