Cargando…

Systematic Analysis of REBASE Identifies Numerous Type I Restriction-Modification Systems with Duplicated, Distinct hsdS Specificity Genes That Can Switch System Specificity by Recombination

N(6)-Adenine DNA methyltransferases associated with some Type I and Type III restriction-modification (R-M) systems are able to undergo phase variation, randomly switching expression ON or OFF by varying the length of locus-encoded simple sequence repeats (SSRs). This variation of methyltransferase...

Descripción completa

Detalles Bibliográficos
Autores principales:	Atack, John M., Guo, Chengying, Litfin, Thomas, Yang, Long, Blackall, Patrick J., Zhou, Yaoqi, Jennings, Michael P.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	American Society for Microbiology 2020
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7394358/ https://www.ncbi.nlm.nih.gov/pubmed/32723795 http://dx.doi.org/10.1128/mSystems.00497-20

Ejemplares similares

hsdS, Belonging to the Type I Restriction-Modification System, Contributes to the Streptococcus suis Serotype 2 Survival Ability in Phagocytes
por: Xu, Bin, et al.
Publicado: (2017)

DNA sequence repeats identify numerous Type I restriction‐modification systems that are potential epigenetic regulators controlling phase‐variable regulons; phasevarions
por: Atack, John M., et al.
Publicado: (2019)

REBASE—restriction enzymes and DNA methyltransferases
por: Roberts, Richard J., et al.
Publicado: (2005)

Comparative Analysis of Streptococcus pneumoniae Type I Restriction-Modification Loci: Variation in hsdS Gene Target Recognition Domains
por: Oliver, Melissa B., et al.
Publicado: (2020)

Removal of a frameshift between the hsdM and hsdS genes of the EcoKI Type IA DNA restriction and modification system produces a new type of system and links the different families of Type I systems
por: Roberts, Gareth A., et al.
Publicado: (2012)

REBASE—enzymes and genes for DNA restriction and modification
por: Roberts, Richard J., et al.
Publicado: (2007)

A survey of Type III restriction-modification systems reveals numerous, novel epigenetic regulators controlling phase-variable regulons; phasevarions
por: Atack, John M, et al.
Publicado: (2018)

Structure of HsdS Subunit from Thermoanaerobacter tengcongensis Sheds Lights on Mechanism of Dynamic Opening and Closing of Type I Methyltransferase
por: Gao, Pu, et al.
Publicado: (2011)

REBASE—a database for DNA restriction and modification: enzymes, genes and genomes
por: Roberts, Richard J., et al.
Publicado: (2010)

REBASE—a database for DNA restriction and modification: enzymes, genes and genomes
por: Roberts, Richard J., et al.
Publicado: (2014)

REBASE: a database for DNA restriction and modification: enzymes, genes and genomes
por: Roberts, Richard J, et al.
Publicado: (2022)

Measuring hospital input price increases: The rebased hospital market basket
por: Freeland, Mark S., et al.
Publicado: (1991)

NAFLD Aggravates Septic Shock Due to Inadequate Adrenal Response and 11β-HSDs Dysregulation in Rats
por: Huang, Hui-Chun, et al.
Publicado: (2020)

Genome-wide analysis revealed the stepwise origin and functional diversification of HSDs from lower to higher plant species
por: Saleem, Noor, et al.
Publicado: (2023)

3 = 1 + 2: how the divide conquered de novo protein structure prediction and what is next?
por: Zhou, Yaoqi, et al.
Publicado: (2023)

High-throughput mapping of RNA solvent accessibility at the single-nucleotide resolution by RtcB ligation between a fixed 5′-OH-end linker and unique 3′-P-end fragments from hydroxyl radical cleavage
por: Solayman, Md, et al.
Publicado: (2022)

SPOT-Disorder2: Improved Protein Intrinsic Disorder Prediction by Ensembled Deep Learning
por: Hanson, Jack, et al.
Publicado: (2019)

Reaching alignment-profile-based accuracy in predicting protein secondary and tertiary structural properties without alignment
por: Singh, Jaspreet, et al.
Publicado: (2022)

SPOT-Contact-LM: improving single-sequence-based prediction of protein contact map using a transformer language model
por: Singh, Jaspreet, et al.
Publicado: (2022)

Predicting RNA distance-based contact maps by integrated deep learning on physics-inferred secondary structure and evolutionary-derived mutational coupling
por: Singh, Jaswinder, et al.
Publicado: (2022)

Region-specific expression of young small-scale duplications in the human central nervous system
por: Brohard-Julien, Solène, et al.
Publicado: (2021)

SAT-734 HSD3B1 Expression in the Human Immune System
por: McManus, Jeffrey M, et al.
Publicado: (2020)

Probing RNA structures and functions by solvent accessibility: an overview from experimental and computational perspectives
por: Solayman, Md, et al.
Publicado: (2022)

Increased systemic and adipose 11β-HSD1 activity in idiopathic intracranial hypertension
por: Westgate, Connar S J, et al.
Publicado: (2022)

Moraxella catarrhalis Restriction–Modification Systems Are Associated with Phylogenetic Lineage and Disease
por: Blakeway, Luke V, et al.
Publicado: (2018)

ArdC, a ssDNA-binding protein with a metalloprotease domain, overpasses the recipient hsdRMS restriction system broadening conjugation host range
por: González-Montes, Lorena, et al.
Publicado: (2020)

Nucleotide Sugar Transporter SLC35 Family Structure and Function
por: Hadley, Barbara, et al.
Publicado: (2019)

An alternative approach to study the enzymatic specificities of the CfrBI restriction–modification system
por: Zakharova, Marina V., et al.
Publicado: (2019)

Genetic variation regulates the activation and specificity of Restriction-Modification systems in Neisseria gonorrhoeae
por: Sánchez-Busó, Leonor, et al.
Publicado: (2019)

Xp11.22 duplications in four unrelated Chinese families: delineating the genotype-phenotype relationship for HSD17B10 and FGD1
por: Wang, Qingming, et al.
Publicado: (2020)

Artificial nondirectional site-specific recombination systems
por: Wang, Jun-Yi, et al.
Publicado: (2021)

Specific pathways prevent duplication-mediated genome rearrangements
por: Putnam, Christopher D., et al.
Publicado: (2009)

Transcriptional fates of human-specific segmental duplications in brain
por: Dougherty, Max L., et al.
Publicado: (2018)

The evolution and population diversity of human-specific segmental duplications
por: Dennis, Megan Y., et al.
Publicado: (2017)

Species-Specific Duplication of Surface Antigen Genes in Paramecium
por: Pirritano, Marcello, et al.
Publicado: (2022)

Forebrain‐Specific Transgene Rescue of 11β‐HSD1 Associates with Impaired Spatial Memory and Reduced Hippocampal Brain‐Derived Neurotrophic Factor mRNA Levels in Aged 11β‐HSD1 Deficient Mice
por: Caughey, S., et al.
Publicado: (2017)

Duplication of spiralian-specific TALE genes and evolution of the blastomere specification mechanism in the bivalve lineage
por: Phuangphong, Supanat, et al.
Publicado: (2021)

Switching the substrate specificity of lysoplasmalogen‐specific phospholipase D
por: Oyama, Takayuki, et al.
Publicado: (2021)

Tissue-specific alteration of gene expression and function by RU486 and the GeneSwitch system
por: Robles-Murguia, Maricela, et al.
Publicado: (2019)

Association Between Adrenal-Restrictive HSD3B1 Inheritance and Hormone-Independent Subtypes of Endometrial and Breast Cancer
por: McManus, Jeffrey M, et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_mk9805l1ackgbp8spa33nnkcch