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De novo sequence assembly requires bioinformatic checking of chimeric sequences

De novo assembly of sequence reads from next generation sequencing platforms is a common strategy for detecting presence and sequencing of viruses in biospecimens. Amplification artifacts and presence of several related viruses in the same specimen can lead to assembly of erroneous, chimeric sequenc...

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Detalles Bibliográficos
Autores principales: Arroyo Mühr, Laila Sara, Lagheden, Camilla, Hassan, Sadaf Sakina, Kleppe, Sara Nordqvist, Hultin, Emilie, Dillner, Joakim
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7417191/
https://www.ncbi.nlm.nih.gov/pubmed/32777809
http://dx.doi.org/10.1371/journal.pone.0237455