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D-graph clusters flaviviruses and β-coronaviruses according to their hosts, disease type and human cell receptors

MOTIVATION: There is a need for rapid and easy to use, alignment free methods to cluster large groups of protein sequence data. Commonly used phylogenetic trees based on alignments can be used to visualize only a limited number of protein sequences. DGraph, introduced here, is a dynamic programming...

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Detalles Bibliográficos
Autores principales: Braun, Benjamin A., Schein, Catherine H., Braun, Werner
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7430575/
https://www.ncbi.nlm.nih.gov/pubmed/32817945
http://dx.doi.org/10.1101/2020.08.13.249649