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Scavenger: A pipeline for recovery of unaligned reads utilising similarity with aligned reads

Read alignment is an important step in RNA-seq analysis as the result of alignment forms the basis for downstream analyses. However, recent studies have shown that published alignment tools have variable mapping sensitivity and do not necessarily align all the reads which should have been aligned, a...

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Detalles Bibliográficos
Autores principales: Yang, Andrian, Tang, Joshua Y. S., Troup, Michael, Ho, Joshua W. K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: F1000 Research Limited 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7459848/
https://www.ncbi.nlm.nih.gov/pubmed/32913631
http://dx.doi.org/10.12688/f1000research.19426.2