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Synthesis by deamination reaction and crystal structure at 120 K of (16Z,19E)-18-oxo-N-(pyridin-2-yl)-6,7,9,10-tetra­hydro-18H-dibenzo[h,o][1,4,7]trioxa­cyclo­hexa­decine-17-carboxamide

The title compound, C(27)H(24)N(2)O(5), is a product of the deamination reaction from aza-14-crown-4 ether containing the γ-piperidone subunit. The title mol­ecule contains a 16-membered macrocycle with the conformation of the C—O—C—C—O—C—C—O—C polyether chain being t–g ((-))–t–t–g ((+))–t (t = tran...

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Autores principales: Wodajo, Ayalew T., Tran, Thi Thanh Van, Truong, Hong Hieu, Tskhovrebov, Alexander G., Le, The Duan, Khrustalev, Victor N., Le, Tuan Anh
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7472769/
https://www.ncbi.nlm.nih.gov/pubmed/32939299
http://dx.doi.org/10.1107/S2056989020010968
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author Wodajo, Ayalew T.
Tran, Thi Thanh Van
Truong, Hong Hieu
Tskhovrebov, Alexander G.
Le, The Duan
Khrustalev, Victor N.
Le, Tuan Anh
author_facet Wodajo, Ayalew T.
Tran, Thi Thanh Van
Truong, Hong Hieu
Tskhovrebov, Alexander G.
Le, The Duan
Khrustalev, Victor N.
Le, Tuan Anh
author_sort Wodajo, Ayalew T.
collection PubMed
description The title compound, C(27)H(24)N(2)O(5), is a product of the deamination reaction from aza-14-crown-4 ether containing the γ-piperidone subunit. The title mol­ecule contains a 16-membered macrocycle with the conformation of the C—O—C—C—O—C—C—O—C polyether chain being t–g ((-))–t–t–g ((+))–t (t = trans, 180°; g = gauche, ±60°). The dihedral angle between the planes of the benzene rings fused to the aza-14-crown-4-ether moiety is 31.11 (14)°. The cavity size inside the macrocycle is 4.72 Å. The macrocycle is significantly flattened as a result of the extended conjugated system. Steric repulsion between the pyridyl­carboxamide fragment and the benzene ring results in a slight deviation of macrocycle from planarity. The structure also features intra­molecular hydrogen bonding, which results in a deviation of the angle between the planes of amide and pyridyl groups from planarity: this angle is 16.32 (18)°. In the crystal, the mol­ecules are linked into infinite zigzag chains via inter­molecular C—H⋯π contacts. The chains are bound into layers parallel to (100) by weak inter­molecular C—H⋯O hydrogen bonds.
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spelling pubmed-74727692020-09-15 Synthesis by deamination reaction and crystal structure at 120 K of (16Z,19E)-18-oxo-N-(pyridin-2-yl)-6,7,9,10-tetra­hydro-18H-dibenzo[h,o][1,4,7]trioxa­cyclo­hexa­decine-17-carboxamide Wodajo, Ayalew T. Tran, Thi Thanh Van Truong, Hong Hieu Tskhovrebov, Alexander G. Le, The Duan Khrustalev, Victor N. Le, Tuan Anh Acta Crystallogr E Crystallogr Commun Research Communications The title compound, C(27)H(24)N(2)O(5), is a product of the deamination reaction from aza-14-crown-4 ether containing the γ-piperidone subunit. The title mol­ecule contains a 16-membered macrocycle with the conformation of the C—O—C—C—O—C—C—O—C polyether chain being t–g ((-))–t–t–g ((+))–t (t = trans, 180°; g = gauche, ±60°). The dihedral angle between the planes of the benzene rings fused to the aza-14-crown-4-ether moiety is 31.11 (14)°. The cavity size inside the macrocycle is 4.72 Å. The macrocycle is significantly flattened as a result of the extended conjugated system. Steric repulsion between the pyridyl­carboxamide fragment and the benzene ring results in a slight deviation of macrocycle from planarity. The structure also features intra­molecular hydrogen bonding, which results in a deviation of the angle between the planes of amide and pyridyl groups from planarity: this angle is 16.32 (18)°. In the crystal, the mol­ecules are linked into infinite zigzag chains via inter­molecular C—H⋯π contacts. The chains are bound into layers parallel to (100) by weak inter­molecular C—H⋯O hydrogen bonds. International Union of Crystallography 2020-08-14 /pmc/articles/PMC7472769/ /pubmed/32939299 http://dx.doi.org/10.1107/S2056989020010968 Text en © Wodajo et al. 2020 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Research Communications
Wodajo, Ayalew T.
Tran, Thi Thanh Van
Truong, Hong Hieu
Tskhovrebov, Alexander G.
Le, The Duan
Khrustalev, Victor N.
Le, Tuan Anh
Synthesis by deamination reaction and crystal structure at 120 K of (16Z,19E)-18-oxo-N-(pyridin-2-yl)-6,7,9,10-tetra­hydro-18H-dibenzo[h,o][1,4,7]trioxa­cyclo­hexa­decine-17-carboxamide
title Synthesis by deamination reaction and crystal structure at 120 K of (16Z,19E)-18-oxo-N-(pyridin-2-yl)-6,7,9,10-tetra­hydro-18H-dibenzo[h,o][1,4,7]trioxa­cyclo­hexa­decine-17-carboxamide
title_full Synthesis by deamination reaction and crystal structure at 120 K of (16Z,19E)-18-oxo-N-(pyridin-2-yl)-6,7,9,10-tetra­hydro-18H-dibenzo[h,o][1,4,7]trioxa­cyclo­hexa­decine-17-carboxamide
title_fullStr Synthesis by deamination reaction and crystal structure at 120 K of (16Z,19E)-18-oxo-N-(pyridin-2-yl)-6,7,9,10-tetra­hydro-18H-dibenzo[h,o][1,4,7]trioxa­cyclo­hexa­decine-17-carboxamide
title_full_unstemmed Synthesis by deamination reaction and crystal structure at 120 K of (16Z,19E)-18-oxo-N-(pyridin-2-yl)-6,7,9,10-tetra­hydro-18H-dibenzo[h,o][1,4,7]trioxa­cyclo­hexa­decine-17-carboxamide
title_short Synthesis by deamination reaction and crystal structure at 120 K of (16Z,19E)-18-oxo-N-(pyridin-2-yl)-6,7,9,10-tetra­hydro-18H-dibenzo[h,o][1,4,7]trioxa­cyclo­hexa­decine-17-carboxamide
title_sort synthesis by deamination reaction and crystal structure at 120 k of (16z,19e)-18-oxo-n-(pyridin-2-yl)-6,7,9,10-tetra­hydro-18h-dibenzo[h,o][1,4,7]trioxa­cyclo­hexa­decine-17-carboxamide
topic Research Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7472769/
https://www.ncbi.nlm.nih.gov/pubmed/32939299
http://dx.doi.org/10.1107/S2056989020010968
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