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G-quadruplex stabilization in the ions and maltose transporters gene inhibit Salmonella enterica growth and virulence
The G-quadruplex structure is a highly conserved drug target for preventing infection of several human pathogens. We tried to explore G-quadruplex forming motifs as promising drug targets in the genome of Salmonella enterica that causes enteric fever in humans. Herein, we report three highly conserv...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier Inc.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7474834/ https://www.ncbi.nlm.nih.gov/pubmed/32898642 http://dx.doi.org/10.1016/j.ygeno.2020.09.010 |
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author | Jain, Neha Mishra, Subodh Kumar Shankar, Uma Jaiswal, Ankit Sharma, Tarun Kumar Kodgire, Prashant Kumar, Amit |
author_facet | Jain, Neha Mishra, Subodh Kumar Shankar, Uma Jaiswal, Ankit Sharma, Tarun Kumar Kodgire, Prashant Kumar, Amit |
author_sort | Jain, Neha |
collection | PubMed |
description | The G-quadruplex structure is a highly conserved drug target for preventing infection of several human pathogens. We tried to explore G-quadruplex forming motifs as promising drug targets in the genome of Salmonella enterica that causes enteric fever in humans. Herein, we report three highly conserved G-quadruplex motifs (SE-PGQ-1, 2, and 3) in the genome of Salmonella enterica. Bioinformatics analysis inferred the presence of SE-PGQ-1 in the regulatory region of mgtA, SE-PGQ-2 in ORF of entA, and SE-PGQ-3 in the promoter region of malE and malK genes. The G-quadruplex forming sequences were confirmed by biophysical and biomolecular techniques. Cellular studies affirm the inhibitory effect of G-quadruplex specific ligands on Salmonella enterica growth. Further, PCR inhibition, reporter based assay, and RT-qPCR assays emphasize the biological relevance of G-quadruplexes in these genes. Thus, this study confirmed the presence of G-quadruplex motifs in Salmonella enterica and characterized them as a promising drug target. |
format | Online Article Text |
id | pubmed-7474834 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Elsevier Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-74748342020-09-08 G-quadruplex stabilization in the ions and maltose transporters gene inhibit Salmonella enterica growth and virulence Jain, Neha Mishra, Subodh Kumar Shankar, Uma Jaiswal, Ankit Sharma, Tarun Kumar Kodgire, Prashant Kumar, Amit Genomics Article The G-quadruplex structure is a highly conserved drug target for preventing infection of several human pathogens. We tried to explore G-quadruplex forming motifs as promising drug targets in the genome of Salmonella enterica that causes enteric fever in humans. Herein, we report three highly conserved G-quadruplex motifs (SE-PGQ-1, 2, and 3) in the genome of Salmonella enterica. Bioinformatics analysis inferred the presence of SE-PGQ-1 in the regulatory region of mgtA, SE-PGQ-2 in ORF of entA, and SE-PGQ-3 in the promoter region of malE and malK genes. The G-quadruplex forming sequences were confirmed by biophysical and biomolecular techniques. Cellular studies affirm the inhibitory effect of G-quadruplex specific ligands on Salmonella enterica growth. Further, PCR inhibition, reporter based assay, and RT-qPCR assays emphasize the biological relevance of G-quadruplexes in these genes. Thus, this study confirmed the presence of G-quadruplex motifs in Salmonella enterica and characterized them as a promising drug target. Elsevier Inc. 2020-11 2020-09-06 /pmc/articles/PMC7474834/ /pubmed/32898642 http://dx.doi.org/10.1016/j.ygeno.2020.09.010 Text en © 2020 Elsevier Inc. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active. |
spellingShingle | Article Jain, Neha Mishra, Subodh Kumar Shankar, Uma Jaiswal, Ankit Sharma, Tarun Kumar Kodgire, Prashant Kumar, Amit G-quadruplex stabilization in the ions and maltose transporters gene inhibit Salmonella enterica growth and virulence |
title | G-quadruplex stabilization in the ions and maltose transporters gene inhibit Salmonella enterica growth and virulence |
title_full | G-quadruplex stabilization in the ions and maltose transporters gene inhibit Salmonella enterica growth and virulence |
title_fullStr | G-quadruplex stabilization in the ions and maltose transporters gene inhibit Salmonella enterica growth and virulence |
title_full_unstemmed | G-quadruplex stabilization in the ions and maltose transporters gene inhibit Salmonella enterica growth and virulence |
title_short | G-quadruplex stabilization in the ions and maltose transporters gene inhibit Salmonella enterica growth and virulence |
title_sort | g-quadruplex stabilization in the ions and maltose transporters gene inhibit salmonella enterica growth and virulence |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7474834/ https://www.ncbi.nlm.nih.gov/pubmed/32898642 http://dx.doi.org/10.1016/j.ygeno.2020.09.010 |
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