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Pharmacophore-driven identification of N-methyl-D-receptor antagonists as potent neuroprotective agents validated using in vivo studies

Alzheimer’s disease (AD), apparently the most widespread reason behind dementia, is delineated by a continuous cognitive weakening in the aged. During its progression, N-methyl-D-aspartate receptor (NMDAR) antagonists are known to play a pivotal part in the mechanisms of learning and memory. Since t...

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Autores principales: Sharma, Mukta, Mittal, Anupama, Singh, Aarti, Jainarayanan, Ashwin K, Sharma, Swapnil, Paliwal, Sarvesh
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7474860/
https://www.ncbi.nlm.nih.gov/pubmed/32913897
http://dx.doi.org/10.1093/biomethods/bpaa013
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author Sharma, Mukta
Mittal, Anupama
Singh, Aarti
Jainarayanan, Ashwin K
Sharma, Swapnil
Paliwal, Sarvesh
author_facet Sharma, Mukta
Mittal, Anupama
Singh, Aarti
Jainarayanan, Ashwin K
Sharma, Swapnil
Paliwal, Sarvesh
author_sort Sharma, Mukta
collection PubMed
description Alzheimer’s disease (AD), apparently the most widespread reason behind dementia, is delineated by a continuous cognitive weakening in the aged. During its progression, N-methyl-D-aspartate receptor (NMDAR) antagonists are known to play a pivotal part in the mechanisms of learning and memory. Since there is an unmet medical need for the treatment of AD, we aim to identify possible chemical compounds targeted toward N-methyl-D-aspartate receptors. Three-dimensional models are developed to unveil some of the essential characteristics of the N-methyl-D-aspartate receptors by using a collection of already discovered N-methyl-D-aspartate receptor inhibitors. This is followed by virtual screening, which results in novel chemical compounds having the potential to inhibit N-methyl-D-aspartate receptors. Molecular docking studies and analysis promulgated two lead compounds with a high LibDock score. The compounds are shortlisted based on high estimated activity, fit values, LibDock score, no violation of Lipinski’s, and availability for procuring. Finally, the shortlisted compounds are tested by employing in vivo studies, which we further propose as potential NMDA inhibitors for treating AD.
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spelling pubmed-74748602020-09-09 Pharmacophore-driven identification of N-methyl-D-receptor antagonists as potent neuroprotective agents validated using in vivo studies Sharma, Mukta Mittal, Anupama Singh, Aarti Jainarayanan, Ashwin K Sharma, Swapnil Paliwal, Sarvesh Biol Methods Protoc Methods Manuscript Alzheimer’s disease (AD), apparently the most widespread reason behind dementia, is delineated by a continuous cognitive weakening in the aged. During its progression, N-methyl-D-aspartate receptor (NMDAR) antagonists are known to play a pivotal part in the mechanisms of learning and memory. Since there is an unmet medical need for the treatment of AD, we aim to identify possible chemical compounds targeted toward N-methyl-D-aspartate receptors. Three-dimensional models are developed to unveil some of the essential characteristics of the N-methyl-D-aspartate receptors by using a collection of already discovered N-methyl-D-aspartate receptor inhibitors. This is followed by virtual screening, which results in novel chemical compounds having the potential to inhibit N-methyl-D-aspartate receptors. Molecular docking studies and analysis promulgated two lead compounds with a high LibDock score. The compounds are shortlisted based on high estimated activity, fit values, LibDock score, no violation of Lipinski’s, and availability for procuring. Finally, the shortlisted compounds are tested by employing in vivo studies, which we further propose as potential NMDA inhibitors for treating AD. Oxford University Press 2020-07-14 /pmc/articles/PMC7474860/ /pubmed/32913897 http://dx.doi.org/10.1093/biomethods/bpaa013 Text en © The Author(s) 2020. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Methods Manuscript
Sharma, Mukta
Mittal, Anupama
Singh, Aarti
Jainarayanan, Ashwin K
Sharma, Swapnil
Paliwal, Sarvesh
Pharmacophore-driven identification of N-methyl-D-receptor antagonists as potent neuroprotective agents validated using in vivo studies
title Pharmacophore-driven identification of N-methyl-D-receptor antagonists as potent neuroprotective agents validated using in vivo studies
title_full Pharmacophore-driven identification of N-methyl-D-receptor antagonists as potent neuroprotective agents validated using in vivo studies
title_fullStr Pharmacophore-driven identification of N-methyl-D-receptor antagonists as potent neuroprotective agents validated using in vivo studies
title_full_unstemmed Pharmacophore-driven identification of N-methyl-D-receptor antagonists as potent neuroprotective agents validated using in vivo studies
title_short Pharmacophore-driven identification of N-methyl-D-receptor antagonists as potent neuroprotective agents validated using in vivo studies
title_sort pharmacophore-driven identification of n-methyl-d-receptor antagonists as potent neuroprotective agents validated using in vivo studies
topic Methods Manuscript
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7474860/
https://www.ncbi.nlm.nih.gov/pubmed/32913897
http://dx.doi.org/10.1093/biomethods/bpaa013
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