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ADEPT: a domain independent sequence alignment strategy for gpu architectures
BACKGROUND: Bioinformatic workflows frequently make use of automated genome assembly and protein clustering tools. At the core of most of these tools, a significant portion of execution time is spent in determining optimal local alignment between two sequences. This task is performed with the Smith-...
Autores principales: | Awan, Muaaz G., Deslippe, Jack, Buluc, Aydin, Selvitopi, Oguz, Hofmeyr, Steven, Oliker, Leonid, Yelick, Katherine |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7493400/ https://www.ncbi.nlm.nih.gov/pubmed/32933482 http://dx.doi.org/10.1186/s12859-020-03720-1 |
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