Variable-order reference-free variant discovery with the Burrows-Wheeler Transform

BACKGROUND: In [Prezza et al., AMB 2019], a new reference-free and alignment-free framework for the detection of SNPs was suggested and tested. The framework, based on the Burrows-Wheeler Transform (BWT), significantly improves sensitivity and precision of previous de Bruijn graphs based tools by ov...

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Detalles Bibliográficos
Autores principales: Prezza, Nicola, Pisanti, Nadia, Sciortino, Marinella, Rosone, Giovanna
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Research
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7493873/
https://www.ncbi.nlm.nih.gov/pubmed/32938358
http://dx.doi.org/10.1186/s12859-020-03586-3

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7493873/
https://www.ncbi.nlm.nih.gov/pubmed/32938358
http://dx.doi.org/10.1186/s12859-020-03586-3

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