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Short k-mer abundance profiles yield robust machine learning features and accurate classifiers for RNA viruses

High-throughput sequencing technologies have greatly enabled the study of genomics, transcriptomics and metagenomics. Automated annotation and classification of the vast amounts of generated sequence data has become paramount for facilitating biological sciences. Genomes of viruses can be radically...

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Detalles Bibliográficos
Autores principales: Alam, Md. Nafis Ul, Chowdhury, Umar Faruq
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7500682/
https://www.ncbi.nlm.nih.gov/pubmed/32946529
http://dx.doi.org/10.1371/journal.pone.0239381