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An optimized desuccinylase activity assay reveals a difference in desuccinylation activity between proliferative and differentiated cells
Succinylation is a novel post-translational modification identified on many proteins and is involved in multiple biological processes. Succinylation levels are dynamically regulated, balanced by succinylation and desuccinylation processes, and are closely connected to metabolic state in vivo. Sirtui...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7552388/ https://www.ncbi.nlm.nih.gov/pubmed/33046741 http://dx.doi.org/10.1038/s41598-020-72833-7 |
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author | Yuan, Taolin Keijer, Jaap Guo, Angela H. Lombard, David B. de Boer, Vincent C. J. |
author_facet | Yuan, Taolin Keijer, Jaap Guo, Angela H. Lombard, David B. de Boer, Vincent C. J. |
author_sort | Yuan, Taolin |
collection | PubMed |
description | Succinylation is a novel post-translational modification identified on many proteins and is involved in multiple biological processes. Succinylation levels are dynamically regulated, balanced by succinylation and desuccinylation processes, and are closely connected to metabolic state in vivo. Sirtuins have been shown to possess NAD(+)-dependent desuccinylation activity in vitro and in vivo, among which the desuccinylation activity of SIRT5 is most extensively studied. Our understanding of the response of succinylation levels to different metabolic conditions, is hampered by the lack of a fast NAD(+)-dependent desuccinylation assay in a physiological context. In the present study, we therefore optimized and validated a fluorescence-based assay for measuring NAD(+)-dependent desuccinylation activity in cell lysates. Our results demonstrated that shorter and stricter reaction time was critical to approach the initial rate of NAD(+)-dependent desuccinylation activity in crude cell lysate systems, as compared to the desuccinylation reaction of purified His-SIRT5. Analysis of desuccinylation activity in SIRT5 knockout HEK293T cells confirmed the relevance of SIRT5 in cellular desuccinylation activity, as well as the presence of other NAD(+)-dependent desuccinylase activities. In addition, we were able to analyse desuccinylation and deacetylation activity in multiple cell lines using this assay. We showed a remarkably higher desuccinylase activity, but not deacetylase activity, in proliferative cultured muscle and adipose cells in comparison with their differentiated counterparts. Our results reveal an alteration in NAD(+)-dependent desuccinylation activity under different metabolic states. |
format | Online Article Text |
id | pubmed-7552388 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-75523882020-10-14 An optimized desuccinylase activity assay reveals a difference in desuccinylation activity between proliferative and differentiated cells Yuan, Taolin Keijer, Jaap Guo, Angela H. Lombard, David B. de Boer, Vincent C. J. Sci Rep Article Succinylation is a novel post-translational modification identified on many proteins and is involved in multiple biological processes. Succinylation levels are dynamically regulated, balanced by succinylation and desuccinylation processes, and are closely connected to metabolic state in vivo. Sirtuins have been shown to possess NAD(+)-dependent desuccinylation activity in vitro and in vivo, among which the desuccinylation activity of SIRT5 is most extensively studied. Our understanding of the response of succinylation levels to different metabolic conditions, is hampered by the lack of a fast NAD(+)-dependent desuccinylation assay in a physiological context. In the present study, we therefore optimized and validated a fluorescence-based assay for measuring NAD(+)-dependent desuccinylation activity in cell lysates. Our results demonstrated that shorter and stricter reaction time was critical to approach the initial rate of NAD(+)-dependent desuccinylation activity in crude cell lysate systems, as compared to the desuccinylation reaction of purified His-SIRT5. Analysis of desuccinylation activity in SIRT5 knockout HEK293T cells confirmed the relevance of SIRT5 in cellular desuccinylation activity, as well as the presence of other NAD(+)-dependent desuccinylase activities. In addition, we were able to analyse desuccinylation and deacetylation activity in multiple cell lines using this assay. We showed a remarkably higher desuccinylase activity, but not deacetylase activity, in proliferative cultured muscle and adipose cells in comparison with their differentiated counterparts. Our results reveal an alteration in NAD(+)-dependent desuccinylation activity under different metabolic states. Nature Publishing Group UK 2020-10-12 /pmc/articles/PMC7552388/ /pubmed/33046741 http://dx.doi.org/10.1038/s41598-020-72833-7 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Yuan, Taolin Keijer, Jaap Guo, Angela H. Lombard, David B. de Boer, Vincent C. J. An optimized desuccinylase activity assay reveals a difference in desuccinylation activity between proliferative and differentiated cells |
title | An optimized desuccinylase activity assay reveals a difference in desuccinylation activity between proliferative and differentiated cells |
title_full | An optimized desuccinylase activity assay reveals a difference in desuccinylation activity between proliferative and differentiated cells |
title_fullStr | An optimized desuccinylase activity assay reveals a difference in desuccinylation activity between proliferative and differentiated cells |
title_full_unstemmed | An optimized desuccinylase activity assay reveals a difference in desuccinylation activity between proliferative and differentiated cells |
title_short | An optimized desuccinylase activity assay reveals a difference in desuccinylation activity between proliferative and differentiated cells |
title_sort | optimized desuccinylase activity assay reveals a difference in desuccinylation activity between proliferative and differentiated cells |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7552388/ https://www.ncbi.nlm.nih.gov/pubmed/33046741 http://dx.doi.org/10.1038/s41598-020-72833-7 |
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