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Theoretical study of the impact of adaptation on cell-fate heterogeneity and fractional killing

Fractional killing illustrates the cell propensity to display a heterogeneous fate response over a wide range of stimuli. The interplay between the nonlinear and stochastic dynamics of biochemical networks plays a fundamental role in shaping this probabilistic response and in reconciling requirement...

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Autores principales: Hurbain, Julien, Labavić, Darka, Thommen, Quentin, Pfeuty, Benjamin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7562916/
https://www.ncbi.nlm.nih.gov/pubmed/33060729
http://dx.doi.org/10.1038/s41598-020-74238-y
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author Hurbain, Julien
Labavić, Darka
Thommen, Quentin
Pfeuty, Benjamin
author_facet Hurbain, Julien
Labavić, Darka
Thommen, Quentin
Pfeuty, Benjamin
author_sort Hurbain, Julien
collection PubMed
description Fractional killing illustrates the cell propensity to display a heterogeneous fate response over a wide range of stimuli. The interplay between the nonlinear and stochastic dynamics of biochemical networks plays a fundamental role in shaping this probabilistic response and in reconciling requirements for heterogeneity and controllability of cell-fate decisions. The stress-induced fate choice between life and death depends on an early adaptation response which may contribute to fractional killing by amplifying small differences between cells. To test this hypothesis, we consider a stochastic modeling framework suited for comprehensive sensitivity analysis of dose response curve through the computation of a fractionality index. Combining bifurcation analysis and Langevin simulation, we show that adaptation dynamics enhances noise-induced cell-fate heterogeneity by shifting from a saddle-node to a saddle-collision transition scenario. The generality of this result is further assessed by a computational analysis of a detailed regulatory network model of apoptosis initiation and by a theoretical analysis of stochastic bifurcation mechanisms. Overall, the present study identifies a cooperative interplay between stochastic, adaptation and decision intracellular processes that could promote cell-fate heterogeneity in many contexts.
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spelling pubmed-75629162020-10-19 Theoretical study of the impact of adaptation on cell-fate heterogeneity and fractional killing Hurbain, Julien Labavić, Darka Thommen, Quentin Pfeuty, Benjamin Sci Rep Article Fractional killing illustrates the cell propensity to display a heterogeneous fate response over a wide range of stimuli. The interplay between the nonlinear and stochastic dynamics of biochemical networks plays a fundamental role in shaping this probabilistic response and in reconciling requirements for heterogeneity and controllability of cell-fate decisions. The stress-induced fate choice between life and death depends on an early adaptation response which may contribute to fractional killing by amplifying small differences between cells. To test this hypothesis, we consider a stochastic modeling framework suited for comprehensive sensitivity analysis of dose response curve through the computation of a fractionality index. Combining bifurcation analysis and Langevin simulation, we show that adaptation dynamics enhances noise-induced cell-fate heterogeneity by shifting from a saddle-node to a saddle-collision transition scenario. The generality of this result is further assessed by a computational analysis of a detailed regulatory network model of apoptosis initiation and by a theoretical analysis of stochastic bifurcation mechanisms. Overall, the present study identifies a cooperative interplay between stochastic, adaptation and decision intracellular processes that could promote cell-fate heterogeneity in many contexts. Nature Publishing Group UK 2020-10-15 /pmc/articles/PMC7562916/ /pubmed/33060729 http://dx.doi.org/10.1038/s41598-020-74238-y Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Hurbain, Julien
Labavić, Darka
Thommen, Quentin
Pfeuty, Benjamin
Theoretical study of the impact of adaptation on cell-fate heterogeneity and fractional killing
title Theoretical study of the impact of adaptation on cell-fate heterogeneity and fractional killing
title_full Theoretical study of the impact of adaptation on cell-fate heterogeneity and fractional killing
title_fullStr Theoretical study of the impact of adaptation on cell-fate heterogeneity and fractional killing
title_full_unstemmed Theoretical study of the impact of adaptation on cell-fate heterogeneity and fractional killing
title_short Theoretical study of the impact of adaptation on cell-fate heterogeneity and fractional killing
title_sort theoretical study of the impact of adaptation on cell-fate heterogeneity and fractional killing
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7562916/
https://www.ncbi.nlm.nih.gov/pubmed/33060729
http://dx.doi.org/10.1038/s41598-020-74238-y
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