Progress in quickly finding orthologs as reciprocal best hits: comparing blast, last, diamond and MMseqs2

BACKGROUND: Finding orthologs remains an important bottleneck in comparative genomics analyses. While the authors of software for the quick comparison of protein sequences evaluate the speed of their software and compare their results against the most usual software for the task, it is not common fo...

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Detalles Bibliográficos
Autores principales: Hernández-Salmerón, Julie E., Moreno-Hagelsieb, Gabriel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Methodology Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7585182/
https://www.ncbi.nlm.nih.gov/pubmed/33099302
http://dx.doi.org/10.1186/s12864-020-07132-6

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7585182/
https://www.ncbi.nlm.nih.gov/pubmed/33099302
http://dx.doi.org/10.1186/s12864-020-07132-6

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