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Melting dsDNA Donor Molecules Greatly Improves Precision Genome Editing in Caenorhabditis elegans

CRISPR genome editing has revolutionized genetics in many organisms. In the nematode Caenorhabditis elegans, one injection into each of the two gonad arms of an adult hermaphrodite exposes hundreds of meiotic germ cells to editing mixtures, permitting the recovery of multiple indels or small precisi...

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Autores principales: Ghanta, Krishna S., Mello, Craig C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Genetics Society of America 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7648581/
https://www.ncbi.nlm.nih.gov/pubmed/32963112
http://dx.doi.org/10.1534/genetics.120.303564
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author Ghanta, Krishna S.
Mello, Craig C.
author_facet Ghanta, Krishna S.
Mello, Craig C.
author_sort Ghanta, Krishna S.
collection PubMed
description CRISPR genome editing has revolutionized genetics in many organisms. In the nematode Caenorhabditis elegans, one injection into each of the two gonad arms of an adult hermaphrodite exposes hundreds of meiotic germ cells to editing mixtures, permitting the recovery of multiple indels or small precision edits from each successfully injected animal. Unfortunately, particularly for long insertions, editing efficiencies can vary widely, necessitating multiple injections, and often requiring coselection strategies. Here, we show that melting double-stranded DNA (dsDNA) donor molecules prior to injection increases the frequency of precise homology-directed repair (HDR) by several fold for longer edits. We describe troubleshooting strategies that enable consistently high editing efficiencies resulting, for example, in up to 100 independent GFP knock-ins from a single injected animal. These efficiencies make C. elegans by far the easiest metazoan to genome edit, removing barriers to the use and adoption of this facile system as a model for understanding animal biology.
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spelling pubmed-76485812020-11-15 Melting dsDNA Donor Molecules Greatly Improves Precision Genome Editing in Caenorhabditis elegans Ghanta, Krishna S. Mello, Craig C. Genetics Investigations CRISPR genome editing has revolutionized genetics in many organisms. In the nematode Caenorhabditis elegans, one injection into each of the two gonad arms of an adult hermaphrodite exposes hundreds of meiotic germ cells to editing mixtures, permitting the recovery of multiple indels or small precision edits from each successfully injected animal. Unfortunately, particularly for long insertions, editing efficiencies can vary widely, necessitating multiple injections, and often requiring coselection strategies. Here, we show that melting double-stranded DNA (dsDNA) donor molecules prior to injection increases the frequency of precise homology-directed repair (HDR) by several fold for longer edits. We describe troubleshooting strategies that enable consistently high editing efficiencies resulting, for example, in up to 100 independent GFP knock-ins from a single injected animal. These efficiencies make C. elegans by far the easiest metazoan to genome edit, removing barriers to the use and adoption of this facile system as a model for understanding animal biology. Genetics Society of America 2020-11 2020-09-22 /pmc/articles/PMC7648581/ /pubmed/32963112 http://dx.doi.org/10.1534/genetics.120.303564 Text en Copyright © 2020 Ghanta and Mello Available freely online through the author-supported open access option. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Investigations
Ghanta, Krishna S.
Mello, Craig C.
Melting dsDNA Donor Molecules Greatly Improves Precision Genome Editing in Caenorhabditis elegans
title Melting dsDNA Donor Molecules Greatly Improves Precision Genome Editing in Caenorhabditis elegans
title_full Melting dsDNA Donor Molecules Greatly Improves Precision Genome Editing in Caenorhabditis elegans
title_fullStr Melting dsDNA Donor Molecules Greatly Improves Precision Genome Editing in Caenorhabditis elegans
title_full_unstemmed Melting dsDNA Donor Molecules Greatly Improves Precision Genome Editing in Caenorhabditis elegans
title_short Melting dsDNA Donor Molecules Greatly Improves Precision Genome Editing in Caenorhabditis elegans
title_sort melting dsdna donor molecules greatly improves precision genome editing in caenorhabditis elegans
topic Investigations
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7648581/
https://www.ncbi.nlm.nih.gov/pubmed/32963112
http://dx.doi.org/10.1534/genetics.120.303564
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