Cargando…

Cohesin residency determines chromatin loop patterns

The organization of chromatin into higher order structures is essential for chromosome segregation, the repair of DNA-damage, and the regulation of gene expression. Using Micro-C XL to detect chromosomal interactions, we observed the pervasive presence of cohesin-dependent loops with defined positio...

Descripción completa

Detalles Bibliográficos
Autores principales:	Costantino, Lorenzo, Hsieh, Tsung-Han S, Lamothe, Rebecca, Darzacq, Xavier, Koshland, Douglas
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	eLife Sciences Publications, Ltd 2020
Materias:	Genetics and Genomics
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7655110/ https://www.ncbi.nlm.nih.gov/pubmed/33170773 http://dx.doi.org/10.7554/eLife.59889

Ejemplares similares

CTCF and cohesin regulate chromatin loop stability with distinct dynamics
por: Hansen, Anders S, et al.
Publicado: (2017)

The spatial regulation of condensin activity in chromosome condensation
por: Lamothe, Rebecca, et al.
Publicado: (2020)

Multiomic analysis of cohesin reveals that ZBTB transcription factors contribute to chromatin interactions
por: Wang, Rui, et al.
Publicado: (2023)

Interallelic complementation provides functional evidence for cohesin–cohesin interactions on DNA
por: Eng, Thomas, et al.
Publicado: (2015)

Cohesin architecture and clustering in vivo
por: Xiang, Siheng, et al.
Publicado: (2021)

The ATPases of cohesin interface with regulators to modulate cohesin-mediated DNA tethering
por: Çamdere, Gamze, et al.
Publicado: (2015)

Cohesin Smc1β determines meiotic chromatin axis loop organization
por: Novak, Ivana, et al.
Publicado: (2008)

Landscape of cohesin-mediated chromatin loops in the human genome
por: Grubert, Fabian, et al.
Publicado: (2020)

Enhancer–promoter interactions and transcription are largely maintained upon acute loss of CTCF, cohesin, WAPL or YY1
por: Hsieh, Tsung-Han S., et al.
Publicado: (2022)

Cohesin-independent segregation of sister chromatids in budding yeast
por: Guacci, Vincent, et al.
Publicado: (2012)

Geometric partitioning of cohesin and condensin is a consequence of chromatin loops
por: Lawrimore, Josh, et al.
Publicado: (2018)

The Cohesin Release Factor WAPL Restricts Chromatin Loop Extension
por: Haarhuis, Judith H.I., et al.
Publicado: (2017)

Chromosomal Addresses of the Cohesin Component Mcd1p
por: Laloraya, Shikha, et al.
Publicado: (2000)

Recent evidence that TADs and chromatin loops are dynamic structures
por: Hansen, Anders S., et al.
Publicado: (2017)

Transcription-dependent cohesin repositioning rewires chromatin loops in cellular senescence
por: Olan, Ioana, et al.
Publicado: (2020)

Cohesin-dependence of neuronal gene expression relates to chromatin loop length
por: Calderon, Lesly, et al.
Publicado: (2022)

Analysis of gene alterations of mitochondrial DNA D-loop regions to determine breast cancer clonality
por: Masuda, S, et al.
Publicado: (2012)

A Conserved Domain in the Scc3 Subunit of Cohesin Mediates the Interaction with Both Mcd1 and the Cohesin Loader Complex
por: Orgil, Ola, et al.
Publicado: (2015)

Depletion of the Chromatin Looping Proteins CTCF and Cohesin Causes Chromatin Compaction: Insight into Chromatin Folding by Polymer Modelling
por: Tark-Dame, Mariliis, et al.
Publicado: (2014)

Cohesin, condensin, and the intramolecular centromere loop together generate the mitotic chromatin spring
por: Stephens, Andrew D., et al.
Publicado: (2011)

Redundant and specific roles of cohesin STAG subunits in chromatin looping and transcriptional control
por: Casa, Valentina, et al.
Publicado: (2020)

Cohesin loops DNA
por: LeBrasseur, Nicole
Publicado: (2006)

Chromatin loops, gene positioning, and gene expression
por: Holwerda, Sjoerd, et al.
Publicado: (2012)

CRISPR-Mediated Reorganization of Chromatin Loop Structure
por: Morgan, Stefanie L., et al.
Publicado: (2018)

ZNF143 in Chromatin Looping and Gene Regulation
por: Ye, Bingyu, et al.
Publicado: (2020)

Correction: Depletion of the Chromatin Looping Proteins CTCF and Cohesin Causes Chromatin Compaction: Insight into Chromatin Folding by Polymer Modelling
Publicado: (2016)

Regulatory network structure determines patterns of intermolecular epistasis
por: Lagator, Mato, et al.
Publicado: (2017)

Histone variants shape chromatin states in Arabidopsis
por: Jamge, Bhagyshree, et al.
Publicado: (2023)

The Kinetochore Is an Enhancer of Pericentric Cohesin Binding
por: Weber, Stewart A, et al.
Publicado: (2004)

In vivo dissection of the chromosome condensation machinery: reversibility of condensation distinguishes contributions of condensin and cohesin
por: Lavoie, Brigitte D., et al.
Publicado: (2002)

Loop Interrupted: Dysfunctional Chromatin Relations in Neurological Diseases
por: Behrends, Marthe, et al.
Publicado: (2021)

The Aurora kinase Ipl1 maintains the centromeric localization of PP2A to protect cohesin during meiosis
por: Yu, Hong-Guo, et al.
Publicado: (2007)

CTCF mediates chromatin looping via N-terminal domain-dependent cohesin retention
por: Pugacheva, Elena M., et al.
Publicado: (2020)

Rec8 Cohesin-mediated Axis-loop chromatin architecture is required for meiotic recombination
por: Sakuno, Takeshi, et al.
Publicado: (2022)

Cohesin Interaction with Centromeric Minichromosomes Shows a Multi-Complex Rod-Shaped Structure
por: Surcel, Alexandra, et al.
Publicado: (2008)

Reorganization of postmitotic neuronal chromatin accessibility for maturation of serotonergic identity
por: Zhang, Xinrui L, et al.
Publicado: (2022)

Cohesin promotes the repair of ionizing radiation-induced DNA double-strand breaks in replicated chromatin
por: Bauerschmidt, Christina, et al.
Publicado: (2010)

S1-DRIP-seq identifies high expression and polyA tracts as major contributors to R-loop formation
por: Wahba, Lamia, et al.
Publicado: (2016)

MutSβ exceeds MutSα in dinucleotide loop repair
por: Kantelinen, J, et al.
Publicado: (2010)

An incoherent feedforward loop facilitates adaptive tuning of gene expression
por: Hong, Jungeui, et al.
Publicado: (2018)

Cannot write session to /tmp/vufind_sessions/sess_pv1im7hbe38l9tp1ih5qfv17kn