Natrix: a Snakemake-based workflow for processing, clustering, and taxonomically assigning amplicon sequencing reads

BACKGROUND: Sequencing of marker genes amplified from environmental samples, known as amplicon sequencing, allows us to resolve some of the hidden diversity and elucidate evolutionary relationships and ecological processes among complex microbial communities. The analysis of large numbers of samples...

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Detalles Bibliográficos
Autores principales: Welzel, Marius, Lange, Anja, Heider, Dominik, Schwarz, Michael, Freisleben, Bernd, Jensen, Manfred, Boenigk, Jens, Beisser, Daniela
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7667751/
https://www.ncbi.nlm.nih.gov/pubmed/33198651
http://dx.doi.org/10.1186/s12859-020-03852-4

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7667751/
https://www.ncbi.nlm.nih.gov/pubmed/33198651
http://dx.doi.org/10.1186/s12859-020-03852-4

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