Properties of Cavities in Biological Structures—A Survey of the Protein Data Bank

We performed a PDB-wide survey of proteins to assess their cavity content, using the SPACEBALL algorithm to calculate the cavity volumes. In addition, we determined the hydropathy character of the cavities. We demonstrate that the cavities of most proteins are hydrophilic, but smaller proteins tend...

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Detalles Bibliográficos
Autores principales: Chwastyk, Mateusz, Panek, Ewa A., Malinowski, Jan, Jaskólski, Mariusz, Cieplak, Marek
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Molecular Biosciences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7677499/
https://www.ncbi.nlm.nih.gov/pubmed/33240933
http://dx.doi.org/10.3389/fmolb.2020.591381

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7677499/
https://www.ncbi.nlm.nih.gov/pubmed/33240933
http://dx.doi.org/10.3389/fmolb.2020.591381

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