Dadasnake, a Snakemake implementation of DADA2 to process amplicon sequencing data for microbial ecology

BACKGROUND: Amplicon sequencing of phylogenetic marker genes, e.g., 16S, 18S, or ITS ribosomal RNA sequences, is still the most commonly used method to determine the composition of microbial communities. Microbial ecologists often have expert knowledge on their biological question and data analysis...

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Detalles Bibliográficos
Autores principales: Weißbecker, Christina, Schnabel, Beatrix, Heintz-Buschart, Anna
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Technical Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7702218/
https://www.ncbi.nlm.nih.gov/pubmed/33252655
http://dx.doi.org/10.1093/gigascience/giaa135

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7702218/
https://www.ncbi.nlm.nih.gov/pubmed/33252655
http://dx.doi.org/10.1093/gigascience/giaa135

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