An investigation of irreproducibility in maximum likelihood phylogenetic inference

Phylogenetic trees are essential for studying biology, but their reproducibility under identical parameter settings remains unexplored. Here, we find that 3515 (18.11%) IQ-TREE-inferred and 1813 (9.34%) RAxML-NG-inferred maximum likelihood (ML) gene trees are topologically irreproducible when execut...

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Detalles Bibliográficos
Autores principales: Shen, Xing-Xing, Li, Yuanning, Hittinger, Chris Todd, Chen, Xue-xin, Rokas, Antonis
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7705714/
https://www.ncbi.nlm.nih.gov/pubmed/33257660
http://dx.doi.org/10.1038/s41467-020-20005-6

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7705714/
https://www.ncbi.nlm.nih.gov/pubmed/33257660
http://dx.doi.org/10.1038/s41467-020-20005-6

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