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The copper(II)-binding tripeptide GHK, a valuable crystallization and phasing tag for macromolecular crystallography
The growth of diffraction-quality crystals and experimental phasing remain two of the main bottlenecks in protein crystallography. Here, the high-affinity copper(II)-binding tripeptide GHK was fused to the N-terminus of a GFP variant and an MBP-FG peptide fusion. The GHK tag promoted crystallization...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7709198/ https://www.ncbi.nlm.nih.gov/pubmed/33263328 http://dx.doi.org/10.1107/S2059798320013741 |
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author | Mehr, Alexander Henneberg, Fabian Chari, Ashwin Görlich, Dirk Huyton, Trevor |
author_facet | Mehr, Alexander Henneberg, Fabian Chari, Ashwin Görlich, Dirk Huyton, Trevor |
author_sort | Mehr, Alexander |
collection | PubMed |
description | The growth of diffraction-quality crystals and experimental phasing remain two of the main bottlenecks in protein crystallography. Here, the high-affinity copper(II)-binding tripeptide GHK was fused to the N-terminus of a GFP variant and an MBP-FG peptide fusion. The GHK tag promoted crystallization, with various residues (His, Asp, His/Pro) from symmetry molecules completing the copper(II) square-pyramidal coordination sphere. Rapid structure determination by copper SAD phasing could be achieved, even at a very low Bijvoet ratio or after significant radiation damage. When collecting highly redundant data at a wavelength close to the copper absorption edge, residual S-atom positions could also be located in log-likelihood-gradient maps and used to improve the phases. The GHK copper SAD method provides a convenient way of both crystallizing and phasing macromolecular structures, and will complement the current trend towards native sulfur SAD and MR-SAD phasing. |
format | Online Article Text |
id | pubmed-7709198 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-77091982020-12-09 The copper(II)-binding tripeptide GHK, a valuable crystallization and phasing tag for macromolecular crystallography Mehr, Alexander Henneberg, Fabian Chari, Ashwin Görlich, Dirk Huyton, Trevor Acta Crystallogr D Struct Biol Research Papers The growth of diffraction-quality crystals and experimental phasing remain two of the main bottlenecks in protein crystallography. Here, the high-affinity copper(II)-binding tripeptide GHK was fused to the N-terminus of a GFP variant and an MBP-FG peptide fusion. The GHK tag promoted crystallization, with various residues (His, Asp, His/Pro) from symmetry molecules completing the copper(II) square-pyramidal coordination sphere. Rapid structure determination by copper SAD phasing could be achieved, even at a very low Bijvoet ratio or after significant radiation damage. When collecting highly redundant data at a wavelength close to the copper absorption edge, residual S-atom positions could also be located in log-likelihood-gradient maps and used to improve the phases. The GHK copper SAD method provides a convenient way of both crystallizing and phasing macromolecular structures, and will complement the current trend towards native sulfur SAD and MR-SAD phasing. International Union of Crystallography 2020-11-19 /pmc/articles/PMC7709198/ /pubmed/33263328 http://dx.doi.org/10.1107/S2059798320013741 Text en © Mehr et al. 2020 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Research Papers Mehr, Alexander Henneberg, Fabian Chari, Ashwin Görlich, Dirk Huyton, Trevor The copper(II)-binding tripeptide GHK, a valuable crystallization and phasing tag for macromolecular crystallography |
title | The copper(II)-binding tripeptide GHK, a valuable crystallization and phasing tag for macromolecular crystallography |
title_full | The copper(II)-binding tripeptide GHK, a valuable crystallization and phasing tag for macromolecular crystallography |
title_fullStr | The copper(II)-binding tripeptide GHK, a valuable crystallization and phasing tag for macromolecular crystallography |
title_full_unstemmed | The copper(II)-binding tripeptide GHK, a valuable crystallization and phasing tag for macromolecular crystallography |
title_short | The copper(II)-binding tripeptide GHK, a valuable crystallization and phasing tag for macromolecular crystallography |
title_sort | copper(ii)-binding tripeptide ghk, a valuable crystallization and phasing tag for macromolecular crystallography |
topic | Research Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7709198/ https://www.ncbi.nlm.nih.gov/pubmed/33263328 http://dx.doi.org/10.1107/S2059798320013741 |
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