Cargando…

The copper(II)-binding tripeptide GHK, a valuable crystallization and phasing tag for macromolecular crystallography

The growth of diffraction-quality crystals and experimental phasing remain two of the main bottlenecks in protein crystallography. Here, the high-affinity copper(II)-binding tripeptide GHK was fused to the N-terminus of a GFP variant and an MBP-FG peptide fusion. The GHK tag promoted crystallization...

Descripción completa

Detalles Bibliográficos
Autores principales: Mehr, Alexander, Henneberg, Fabian, Chari, Ashwin, Görlich, Dirk, Huyton, Trevor
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7709198/
https://www.ncbi.nlm.nih.gov/pubmed/33263328
http://dx.doi.org/10.1107/S2059798320013741
_version_ 1783617700426153984
author Mehr, Alexander
Henneberg, Fabian
Chari, Ashwin
Görlich, Dirk
Huyton, Trevor
author_facet Mehr, Alexander
Henneberg, Fabian
Chari, Ashwin
Görlich, Dirk
Huyton, Trevor
author_sort Mehr, Alexander
collection PubMed
description The growth of diffraction-quality crystals and experimental phasing remain two of the main bottlenecks in protein crystallography. Here, the high-affinity copper(II)-binding tripeptide GHK was fused to the N-terminus of a GFP variant and an MBP-FG peptide fusion. The GHK tag promoted crystallization, with various residues (His, Asp, His/Pro) from symmetry molecules completing the copper(II) square-pyramidal coordination sphere. Rapid structure determination by copper SAD phasing could be achieved, even at a very low Bijvoet ratio or after significant radiation damage. When collecting highly redundant data at a wavelength close to the copper absorption edge, residual S-atom positions could also be located in log-likelihood-gradient maps and used to improve the phases. The GHK copper SAD method provides a convenient way of both crystallizing and phasing macromolecular structures, and will complement the current trend towards native sulfur SAD and MR-SAD phasing.
format Online
Article
Text
id pubmed-7709198
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher International Union of Crystallography
record_format MEDLINE/PubMed
spelling pubmed-77091982020-12-09 The copper(II)-binding tripeptide GHK, a valuable crystallization and phasing tag for macromolecular crystallography Mehr, Alexander Henneberg, Fabian Chari, Ashwin Görlich, Dirk Huyton, Trevor Acta Crystallogr D Struct Biol Research Papers The growth of diffraction-quality crystals and experimental phasing remain two of the main bottlenecks in protein crystallography. Here, the high-affinity copper(II)-binding tripeptide GHK was fused to the N-terminus of a GFP variant and an MBP-FG peptide fusion. The GHK tag promoted crystallization, with various residues (His, Asp, His/Pro) from symmetry molecules completing the copper(II) square-pyramidal coordination sphere. Rapid structure determination by copper SAD phasing could be achieved, even at a very low Bijvoet ratio or after significant radiation damage. When collecting highly redundant data at a wavelength close to the copper absorption edge, residual S-atom positions could also be located in log-likelihood-gradient maps and used to improve the phases. The GHK copper SAD method provides a convenient way of both crystallizing and phasing macromolecular structures, and will complement the current trend towards native sulfur SAD and MR-SAD phasing. International Union of Crystallography 2020-11-19 /pmc/articles/PMC7709198/ /pubmed/33263328 http://dx.doi.org/10.1107/S2059798320013741 Text en © Mehr et al. 2020 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Research Papers
Mehr, Alexander
Henneberg, Fabian
Chari, Ashwin
Görlich, Dirk
Huyton, Trevor
The copper(II)-binding tripeptide GHK, a valuable crystallization and phasing tag for macromolecular crystallography
title The copper(II)-binding tripeptide GHK, a valuable crystallization and phasing tag for macromolecular crystallography
title_full The copper(II)-binding tripeptide GHK, a valuable crystallization and phasing tag for macromolecular crystallography
title_fullStr The copper(II)-binding tripeptide GHK, a valuable crystallization and phasing tag for macromolecular crystallography
title_full_unstemmed The copper(II)-binding tripeptide GHK, a valuable crystallization and phasing tag for macromolecular crystallography
title_short The copper(II)-binding tripeptide GHK, a valuable crystallization and phasing tag for macromolecular crystallography
title_sort copper(ii)-binding tripeptide ghk, a valuable crystallization and phasing tag for macromolecular crystallography
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7709198/
https://www.ncbi.nlm.nih.gov/pubmed/33263328
http://dx.doi.org/10.1107/S2059798320013741
work_keys_str_mv AT mehralexander thecopperiibindingtripeptideghkavaluablecrystallizationandphasingtagformacromolecularcrystallography
AT hennebergfabian thecopperiibindingtripeptideghkavaluablecrystallizationandphasingtagformacromolecularcrystallography
AT chariashwin thecopperiibindingtripeptideghkavaluablecrystallizationandphasingtagformacromolecularcrystallography
AT gorlichdirk thecopperiibindingtripeptideghkavaluablecrystallizationandphasingtagformacromolecularcrystallography
AT huytontrevor thecopperiibindingtripeptideghkavaluablecrystallizationandphasingtagformacromolecularcrystallography
AT mehralexander copperiibindingtripeptideghkavaluablecrystallizationandphasingtagformacromolecularcrystallography
AT hennebergfabian copperiibindingtripeptideghkavaluablecrystallizationandphasingtagformacromolecularcrystallography
AT chariashwin copperiibindingtripeptideghkavaluablecrystallizationandphasingtagformacromolecularcrystallography
AT gorlichdirk copperiibindingtripeptideghkavaluablecrystallizationandphasingtagformacromolecularcrystallography
AT huytontrevor copperiibindingtripeptideghkavaluablecrystallizationandphasingtagformacromolecularcrystallography