Cargando…

A New Crystal Form of the SARS-CoV-2 Receptor Binding Domain: CR3022 Complex—An Ideal Target for In-Crystal Fragment Screening of the ACE2 Binding Site Surface

In-crystal fragment screening is a powerful tool to chemically probe the surfaces used by proteins to interact, and identify the chemical space worth exploring to design protein-protein inhibitors. A crucial prerequisite is the identification of a crystal form where the target area is exposed and ac...

Descripción completa

Detalles Bibliográficos
Autores principales: Nichols, Charlie, Ng, Joseph, Keshu, Annika, Fraternali, Franca, De Nicola, Gian F.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7768231/
https://www.ncbi.nlm.nih.gov/pubmed/33381049
http://dx.doi.org/10.3389/fphar.2020.615211
_version_ 1783629115302084608
author Nichols, Charlie
Ng, Joseph
Keshu, Annika
Fraternali, Franca
De Nicola, Gian F.
author_facet Nichols, Charlie
Ng, Joseph
Keshu, Annika
Fraternali, Franca
De Nicola, Gian F.
author_sort Nichols, Charlie
collection PubMed
description In-crystal fragment screening is a powerful tool to chemically probe the surfaces used by proteins to interact, and identify the chemical space worth exploring to design protein-protein inhibitors. A crucial prerequisite is the identification of a crystal form where the target area is exposed and accessible to be probed by fragments. Here we report a crystal form of the SARS-CoV-2 Receptor Binding Domain in complex with the CR3022 antibody where the ACE2 binding site on the Receptor Binding Domain is exposed and accessible. This crystal form of the complex is a valuable tool to develop antiviral molecules that could act by blocking the virus entry in cells.
format Online
Article
Text
id pubmed-7768231
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-77682312020-12-29 A New Crystal Form of the SARS-CoV-2 Receptor Binding Domain: CR3022 Complex—An Ideal Target for In-Crystal Fragment Screening of the ACE2 Binding Site Surface Nichols, Charlie Ng, Joseph Keshu, Annika Fraternali, Franca De Nicola, Gian F. Front Pharmacol Pharmacology In-crystal fragment screening is a powerful tool to chemically probe the surfaces used by proteins to interact, and identify the chemical space worth exploring to design protein-protein inhibitors. A crucial prerequisite is the identification of a crystal form where the target area is exposed and accessible to be probed by fragments. Here we report a crystal form of the SARS-CoV-2 Receptor Binding Domain in complex with the CR3022 antibody where the ACE2 binding site on the Receptor Binding Domain is exposed and accessible. This crystal form of the complex is a valuable tool to develop antiviral molecules that could act by blocking the virus entry in cells. Frontiers Media S.A. 2020-12-14 /pmc/articles/PMC7768231/ /pubmed/33381049 http://dx.doi.org/10.3389/fphar.2020.615211 Text en Copyright © 2020 De Nicola, Nichols, Fraternali, Ng and Keshu http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Pharmacology
Nichols, Charlie
Ng, Joseph
Keshu, Annika
Fraternali, Franca
De Nicola, Gian F.
A New Crystal Form of the SARS-CoV-2 Receptor Binding Domain: CR3022 Complex—An Ideal Target for In-Crystal Fragment Screening of the ACE2 Binding Site Surface
title A New Crystal Form of the SARS-CoV-2 Receptor Binding Domain: CR3022 Complex—An Ideal Target for In-Crystal Fragment Screening of the ACE2 Binding Site Surface
title_full A New Crystal Form of the SARS-CoV-2 Receptor Binding Domain: CR3022 Complex—An Ideal Target for In-Crystal Fragment Screening of the ACE2 Binding Site Surface
title_fullStr A New Crystal Form of the SARS-CoV-2 Receptor Binding Domain: CR3022 Complex—An Ideal Target for In-Crystal Fragment Screening of the ACE2 Binding Site Surface
title_full_unstemmed A New Crystal Form of the SARS-CoV-2 Receptor Binding Domain: CR3022 Complex—An Ideal Target for In-Crystal Fragment Screening of the ACE2 Binding Site Surface
title_short A New Crystal Form of the SARS-CoV-2 Receptor Binding Domain: CR3022 Complex—An Ideal Target for In-Crystal Fragment Screening of the ACE2 Binding Site Surface
title_sort new crystal form of the sars-cov-2 receptor binding domain: cr3022 complex—an ideal target for in-crystal fragment screening of the ace2 binding site surface
topic Pharmacology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7768231/
https://www.ncbi.nlm.nih.gov/pubmed/33381049
http://dx.doi.org/10.3389/fphar.2020.615211
work_keys_str_mv AT nicholscharlie anewcrystalformofthesarscov2receptorbindingdomaincr3022complexanidealtargetforincrystalfragmentscreeningoftheace2bindingsitesurface
AT ngjoseph anewcrystalformofthesarscov2receptorbindingdomaincr3022complexanidealtargetforincrystalfragmentscreeningoftheace2bindingsitesurface
AT keshuannika anewcrystalformofthesarscov2receptorbindingdomaincr3022complexanidealtargetforincrystalfragmentscreeningoftheace2bindingsitesurface
AT fraternalifranca anewcrystalformofthesarscov2receptorbindingdomaincr3022complexanidealtargetforincrystalfragmentscreeningoftheace2bindingsitesurface
AT denicolagianf anewcrystalformofthesarscov2receptorbindingdomaincr3022complexanidealtargetforincrystalfragmentscreeningoftheace2bindingsitesurface
AT nicholscharlie newcrystalformofthesarscov2receptorbindingdomaincr3022complexanidealtargetforincrystalfragmentscreeningoftheace2bindingsitesurface
AT ngjoseph newcrystalformofthesarscov2receptorbindingdomaincr3022complexanidealtargetforincrystalfragmentscreeningoftheace2bindingsitesurface
AT keshuannika newcrystalformofthesarscov2receptorbindingdomaincr3022complexanidealtargetforincrystalfragmentscreeningoftheace2bindingsitesurface
AT fraternalifranca newcrystalformofthesarscov2receptorbindingdomaincr3022complexanidealtargetforincrystalfragmentscreeningoftheace2bindingsitesurface
AT denicolagianf newcrystalformofthesarscov2receptorbindingdomaincr3022complexanidealtargetforincrystalfragmentscreeningoftheace2bindingsitesurface