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Convex hulls in hamming space enable efficient search for similarity and clustering of genomic sequences
BACKGROUND: In molecular epidemiology, comparison of intra-host viral variants among infected persons is frequently used for tracing transmissions in human population and detecting viral infection outbreaks. Application of Ultra-Deep Sequencing (UDS) immensely increases the sensitivity of transmissi...
| Autores principales: | , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
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BioMed Central
2020
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| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7772912/ https://www.ncbi.nlm.nih.gov/pubmed/33375937 http://dx.doi.org/10.1186/s12859-020-03811-z |