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1190. Dual-Plasmid Technology for Precision Genome Editing in Staphylococcus aureus

BACKGROUND: Genetic manipulation of Staphylococcus aureus (both methicillin sensitive S. aureus, MSSA, and methicillin resistant S. aureus, MRSA) poses a technical challenge due to poor transformation efficiency, limited endogenous DNA repair activity, lineage-specific methylation patterns and intri...

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Autores principales: Reish, Jennifer, Dey, Somrita, Penewit, Kelsi, Salipante, Stephen J, Berti, Andrew David
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7777601/
http://dx.doi.org/10.1093/ofid/ofaa439.1375
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author Reish, Jennifer
Dey, Somrita
Penewit, Kelsi
Salipante, Stephen J
Berti, Andrew David
author_facet Reish, Jennifer
Dey, Somrita
Penewit, Kelsi
Salipante, Stephen J
Berti, Andrew David
author_sort Reish, Jennifer
collection PubMed
description BACKGROUND: Genetic manipulation of Staphylococcus aureus (both methicillin sensitive S. aureus, MSSA, and methicillin resistant S. aureus, MRSA) poses a technical challenge due to poor transformation efficiency, limited endogenous DNA repair activity, lineage-specific methylation patterns and intrinsic resistance to common selectable markers. METHODS: To address transformation efficiency we have optimized electrocompetent cell preparation and electroporation protocols for staphylococci. Further, we have improved a CRISPR counterselection platform that delivers a heterologous ssDNA recombinase and an inducible Cas9 endonuclease. When used for recombineering and counterselection, this strategy allows minimization of the number of elements necessary to transform in a single electroporation event. The Cas9 delivery platform has been modified to include a range of selectable markers including resistance to apramycin, erythromycin, kanamycin, nourseothricin, spectinomycin or trimethoprim. RESULTS: Overall electroporation efficiency increased by multiple orders of magnitude (> 100×) using the optimized cell preparation protocol. The CRISPR delivery platform can be stably maintained in a repressed state for multiple generations and induced with anhydrotetracycline. We have introduced targeted mutations in multiple loci using this system with an average turnaround time of 12 days. CONCLUSION: This improved dual-plasmid CRISPR platform is robust and allows the investigator to rapidly and specifically alter the genomes of staphylococci. These tools will facilitate the study of how specific genetic polymorphisms contribute to various phenotypes in S. aureus, including the virulence of MRSA. DISCLOSURES: All Authors: No reported disclosures
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spelling pubmed-77776012021-01-07 1190. Dual-Plasmid Technology for Precision Genome Editing in Staphylococcus aureus Reish, Jennifer Dey, Somrita Penewit, Kelsi Salipante, Stephen J Berti, Andrew David Open Forum Infect Dis Poster Abstracts BACKGROUND: Genetic manipulation of Staphylococcus aureus (both methicillin sensitive S. aureus, MSSA, and methicillin resistant S. aureus, MRSA) poses a technical challenge due to poor transformation efficiency, limited endogenous DNA repair activity, lineage-specific methylation patterns and intrinsic resistance to common selectable markers. METHODS: To address transformation efficiency we have optimized electrocompetent cell preparation and electroporation protocols for staphylococci. Further, we have improved a CRISPR counterselection platform that delivers a heterologous ssDNA recombinase and an inducible Cas9 endonuclease. When used for recombineering and counterselection, this strategy allows minimization of the number of elements necessary to transform in a single electroporation event. The Cas9 delivery platform has been modified to include a range of selectable markers including resistance to apramycin, erythromycin, kanamycin, nourseothricin, spectinomycin or trimethoprim. RESULTS: Overall electroporation efficiency increased by multiple orders of magnitude (> 100×) using the optimized cell preparation protocol. The CRISPR delivery platform can be stably maintained in a repressed state for multiple generations and induced with anhydrotetracycline. We have introduced targeted mutations in multiple loci using this system with an average turnaround time of 12 days. CONCLUSION: This improved dual-plasmid CRISPR platform is robust and allows the investigator to rapidly and specifically alter the genomes of staphylococci. These tools will facilitate the study of how specific genetic polymorphisms contribute to various phenotypes in S. aureus, including the virulence of MRSA. DISCLOSURES: All Authors: No reported disclosures Oxford University Press 2020-12-31 /pmc/articles/PMC7777601/ http://dx.doi.org/10.1093/ofid/ofaa439.1375 Text en © The Author 2020. Published by Oxford University Press on behalf of Infectious Diseases Society of America. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs licence (http://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial reproduction and distribution of the work, in any medium, provided the original work is not altered or transformed in any way, and that the work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Poster Abstracts
Reish, Jennifer
Dey, Somrita
Penewit, Kelsi
Salipante, Stephen J
Berti, Andrew David
1190. Dual-Plasmid Technology for Precision Genome Editing in Staphylococcus aureus
title 1190. Dual-Plasmid Technology for Precision Genome Editing in Staphylococcus aureus
title_full 1190. Dual-Plasmid Technology for Precision Genome Editing in Staphylococcus aureus
title_fullStr 1190. Dual-Plasmid Technology for Precision Genome Editing in Staphylococcus aureus
title_full_unstemmed 1190. Dual-Plasmid Technology for Precision Genome Editing in Staphylococcus aureus
title_short 1190. Dual-Plasmid Technology for Precision Genome Editing in Staphylococcus aureus
title_sort 1190. dual-plasmid technology for precision genome editing in staphylococcus aureus
topic Poster Abstracts
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7777601/
http://dx.doi.org/10.1093/ofid/ofaa439.1375
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