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Three complete mitochondrial genomes of straw-rotting edible fungus Volvariella volvacea using next generation sequencing

The straw-rotting edible fungus Volvariella volvacea is a widely cultivated edible fungus across China and Southeast Asian countries. Three complete mitochondrial genomes of V. volvacea from China, Thailand, and India were determined using the next-generation sequencing technology. The genome sizes...

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Autores principales: Wan, Jianing, Li, Yan, Wang, Hong, Tang, Lihua, Li, Zhengpeng, Zhou, Chenli, Tan, Qi, Bao, Dapeng, Yang, Ruiheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799644/
https://www.ncbi.nlm.nih.gov/pubmed/33474412
http://dx.doi.org/10.1080/23802359.2018.1511849
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author Wan, Jianing
Li, Yan
Wang, Hong
Tang, Lihua
Li, Zhengpeng
Zhou, Chenli
Tan, Qi
Bao, Dapeng
Yang, Ruiheng
author_facet Wan, Jianing
Li, Yan
Wang, Hong
Tang, Lihua
Li, Zhengpeng
Zhou, Chenli
Tan, Qi
Bao, Dapeng
Yang, Ruiheng
author_sort Wan, Jianing
collection PubMed
description The straw-rotting edible fungus Volvariella volvacea is a widely cultivated edible fungus across China and Southeast Asian countries. Three complete mitochondrial genomes of V. volvacea from China, Thailand, and India were determined using the next-generation sequencing technology. The genome sizes of the three strains (China, Thailand, and India) were 62,541 bp, 64,531 bp, and 65,668 bp with GC contents of 38.46%, 38.56%, and 38.52%, respectively. All the genomes encoded 14 conserved protein-coding genes, the small ribosomal RNA subunits (rns), large ribosomal RNA subunits (rnl), and 23 tRNAs were located on the same strand. In the putative protein-coding genes, four introns were distributed in cox1 in the genomes of V23-1 and V8. 5 introns (four introns invaded into cox1and one intron invaded into cob) were detected in Tai8. The phylogenetic analysis confirmed that V. volvacea was a number of Agaricales. This mitochondrial genome may open new avenues for understanding the phylogeny and evolution of Pluteaceae and Agaricales.
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spelling pubmed-77996442021-01-19 Three complete mitochondrial genomes of straw-rotting edible fungus Volvariella volvacea using next generation sequencing Wan, Jianing Li, Yan Wang, Hong Tang, Lihua Li, Zhengpeng Zhou, Chenli Tan, Qi Bao, Dapeng Yang, Ruiheng Mitochondrial DNA B Resour Mitogenome Announcement The straw-rotting edible fungus Volvariella volvacea is a widely cultivated edible fungus across China and Southeast Asian countries. Three complete mitochondrial genomes of V. volvacea from China, Thailand, and India were determined using the next-generation sequencing technology. The genome sizes of the three strains (China, Thailand, and India) were 62,541 bp, 64,531 bp, and 65,668 bp with GC contents of 38.46%, 38.56%, and 38.52%, respectively. All the genomes encoded 14 conserved protein-coding genes, the small ribosomal RNA subunits (rns), large ribosomal RNA subunits (rnl), and 23 tRNAs were located on the same strand. In the putative protein-coding genes, four introns were distributed in cox1 in the genomes of V23-1 and V8. 5 introns (four introns invaded into cox1and one intron invaded into cob) were detected in Tai8. The phylogenetic analysis confirmed that V. volvacea was a number of Agaricales. This mitochondrial genome may open new avenues for understanding the phylogeny and evolution of Pluteaceae and Agaricales. Taylor & Francis 2018-10-27 /pmc/articles/PMC7799644/ /pubmed/33474412 http://dx.doi.org/10.1080/23802359.2018.1511849 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Wan, Jianing
Li, Yan
Wang, Hong
Tang, Lihua
Li, Zhengpeng
Zhou, Chenli
Tan, Qi
Bao, Dapeng
Yang, Ruiheng
Three complete mitochondrial genomes of straw-rotting edible fungus Volvariella volvacea using next generation sequencing
title Three complete mitochondrial genomes of straw-rotting edible fungus Volvariella volvacea using next generation sequencing
title_full Three complete mitochondrial genomes of straw-rotting edible fungus Volvariella volvacea using next generation sequencing
title_fullStr Three complete mitochondrial genomes of straw-rotting edible fungus Volvariella volvacea using next generation sequencing
title_full_unstemmed Three complete mitochondrial genomes of straw-rotting edible fungus Volvariella volvacea using next generation sequencing
title_short Three complete mitochondrial genomes of straw-rotting edible fungus Volvariella volvacea using next generation sequencing
title_sort three complete mitochondrial genomes of straw-rotting edible fungus volvariella volvacea using next generation sequencing
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799644/
https://www.ncbi.nlm.nih.gov/pubmed/33474412
http://dx.doi.org/10.1080/23802359.2018.1511849
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