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Noninvasive characterization of Alzheimer’s disease by circulating, cell-free messenger RNA next-generation sequencing

The lack of accessible noninvasive tools to examine the molecular alterations occurring in the brain limits our understanding of the causes and progression of Alzheimer’s disease (AD), as well as the identification of effective therapeutic strategies. Here, we conducted a comprehensive profiling of...

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Autores principales: Toden, Shusuke, Zhuang, Jiali, Acosta, Alexander D., Karns, Amy P., Salathia, Neeraj S., Brewer, James B., Wilcock, Donna M., Aballi, Jonathan, Nerenberg, Mike, Quake, Stephen R., Ibarra, Arkaitz
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Association for the Advancement of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7821903/
https://www.ncbi.nlm.nih.gov/pubmed/33298436
http://dx.doi.org/10.1126/sciadv.abb1654
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author Toden, Shusuke
Zhuang, Jiali
Acosta, Alexander D.
Karns, Amy P.
Salathia, Neeraj S.
Brewer, James B.
Wilcock, Donna M.
Aballi, Jonathan
Nerenberg, Mike
Quake, Stephen R.
Ibarra, Arkaitz
author_facet Toden, Shusuke
Zhuang, Jiali
Acosta, Alexander D.
Karns, Amy P.
Salathia, Neeraj S.
Brewer, James B.
Wilcock, Donna M.
Aballi, Jonathan
Nerenberg, Mike
Quake, Stephen R.
Ibarra, Arkaitz
author_sort Toden, Shusuke
collection PubMed
description The lack of accessible noninvasive tools to examine the molecular alterations occurring in the brain limits our understanding of the causes and progression of Alzheimer’s disease (AD), as well as the identification of effective therapeutic strategies. Here, we conducted a comprehensive profiling of circulating, cell-free messenger RNA (cf-mRNA) in plasma of 126 patients with AD and 116 healthy controls of similar age. We identified 2591 dysregulated genes in the cf-mRNA of patients with AD, which are enriched in biological processes well known to be associated with AD. Dysregulated genes included brain-specific genes and resembled those identified to be dysregulated in postmortem AD brain tissue. Furthermore, we identified disease-relevant circulating gene transcripts that correlated with the severity of cognitive impairment. These data highlight the potential of high-throughput cf-mRNA sequencing to evaluate AD-related pathophysiological alterations in the brain, leading to precision healthcare solutions that could improve AD patient management.
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spelling pubmed-78219032021-01-29 Noninvasive characterization of Alzheimer’s disease by circulating, cell-free messenger RNA next-generation sequencing Toden, Shusuke Zhuang, Jiali Acosta, Alexander D. Karns, Amy P. Salathia, Neeraj S. Brewer, James B. Wilcock, Donna M. Aballi, Jonathan Nerenberg, Mike Quake, Stephen R. Ibarra, Arkaitz Sci Adv Research Articles The lack of accessible noninvasive tools to examine the molecular alterations occurring in the brain limits our understanding of the causes and progression of Alzheimer’s disease (AD), as well as the identification of effective therapeutic strategies. Here, we conducted a comprehensive profiling of circulating, cell-free messenger RNA (cf-mRNA) in plasma of 126 patients with AD and 116 healthy controls of similar age. We identified 2591 dysregulated genes in the cf-mRNA of patients with AD, which are enriched in biological processes well known to be associated with AD. Dysregulated genes included brain-specific genes and resembled those identified to be dysregulated in postmortem AD brain tissue. Furthermore, we identified disease-relevant circulating gene transcripts that correlated with the severity of cognitive impairment. These data highlight the potential of high-throughput cf-mRNA sequencing to evaluate AD-related pathophysiological alterations in the brain, leading to precision healthcare solutions that could improve AD patient management. American Association for the Advancement of Science 2020-12-09 /pmc/articles/PMC7821903/ /pubmed/33298436 http://dx.doi.org/10.1126/sciadv.abb1654 Text en Copyright © 2020 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution NonCommercial License 4.0 (CC BY-NC). https://creativecommons.org/licenses/by-nc/4.0/ https://creativecommons.org/licenses/by-nc/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial license (https://creativecommons.org/licenses/by-nc/4.0/) , which permits use, distribution, and reproduction in any medium, so long as the resultant use is not for commercial advantage and provided the original work is properly cited.
spellingShingle Research Articles
Toden, Shusuke
Zhuang, Jiali
Acosta, Alexander D.
Karns, Amy P.
Salathia, Neeraj S.
Brewer, James B.
Wilcock, Donna M.
Aballi, Jonathan
Nerenberg, Mike
Quake, Stephen R.
Ibarra, Arkaitz
Noninvasive characterization of Alzheimer’s disease by circulating, cell-free messenger RNA next-generation sequencing
title Noninvasive characterization of Alzheimer’s disease by circulating, cell-free messenger RNA next-generation sequencing
title_full Noninvasive characterization of Alzheimer’s disease by circulating, cell-free messenger RNA next-generation sequencing
title_fullStr Noninvasive characterization of Alzheimer’s disease by circulating, cell-free messenger RNA next-generation sequencing
title_full_unstemmed Noninvasive characterization of Alzheimer’s disease by circulating, cell-free messenger RNA next-generation sequencing
title_short Noninvasive characterization of Alzheimer’s disease by circulating, cell-free messenger RNA next-generation sequencing
title_sort noninvasive characterization of alzheimer’s disease by circulating, cell-free messenger rna next-generation sequencing
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7821903/
https://www.ncbi.nlm.nih.gov/pubmed/33298436
http://dx.doi.org/10.1126/sciadv.abb1654
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