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Data-driven reduction of dendritic morphologies with preserved dendro-somatic responses

Dendrites shape information flow in neurons. Yet, there is little consensus on the level of spatial complexity at which they operate. Through carefully chosen parameter fits, solvable in the least-squares sense, we obtain accurate reduced compartmental models at any level of complexity. We show that...

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Autores principales: Wybo, Willem AM, Jordan, Jakob, Ellenberger, Benjamin, Marti Mengual, Ulisses, Nevian, Thomas, Senn, Walter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: eLife Sciences Publications, Ltd 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7837682/
https://www.ncbi.nlm.nih.gov/pubmed/33494860
http://dx.doi.org/10.7554/eLife.60936
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author Wybo, Willem AM
Jordan, Jakob
Ellenberger, Benjamin
Marti Mengual, Ulisses
Nevian, Thomas
Senn, Walter
author_facet Wybo, Willem AM
Jordan, Jakob
Ellenberger, Benjamin
Marti Mengual, Ulisses
Nevian, Thomas
Senn, Walter
author_sort Wybo, Willem AM
collection PubMed
description Dendrites shape information flow in neurons. Yet, there is little consensus on the level of spatial complexity at which they operate. Through carefully chosen parameter fits, solvable in the least-squares sense, we obtain accurate reduced compartmental models at any level of complexity. We show that (back-propagating) action potentials, Ca(2+) spikes, and N-methyl-D-aspartate spikes can all be reproduced with few compartments. We also investigate whether afferent spatial connectivity motifs admit simplification by ablating targeted branches and grouping affected synapses onto the next proximal dendrite. We find that voltage in the remaining branches is reproduced if temporal conductance fluctuations stay below a limit that depends on the average difference in input resistance between the ablated branches and the next proximal dendrite. Furthermore, our methodology fits reduced models directly from experimental data, without requiring morphological reconstructions. We provide software that automatizes the simplification, eliminating a common hurdle toward including dendritic computations in network models.
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spelling pubmed-78376822021-01-27 Data-driven reduction of dendritic morphologies with preserved dendro-somatic responses Wybo, Willem AM Jordan, Jakob Ellenberger, Benjamin Marti Mengual, Ulisses Nevian, Thomas Senn, Walter eLife Neuroscience Dendrites shape information flow in neurons. Yet, there is little consensus on the level of spatial complexity at which they operate. Through carefully chosen parameter fits, solvable in the least-squares sense, we obtain accurate reduced compartmental models at any level of complexity. We show that (back-propagating) action potentials, Ca(2+) spikes, and N-methyl-D-aspartate spikes can all be reproduced with few compartments. We also investigate whether afferent spatial connectivity motifs admit simplification by ablating targeted branches and grouping affected synapses onto the next proximal dendrite. We find that voltage in the remaining branches is reproduced if temporal conductance fluctuations stay below a limit that depends on the average difference in input resistance between the ablated branches and the next proximal dendrite. Furthermore, our methodology fits reduced models directly from experimental data, without requiring morphological reconstructions. We provide software that automatizes the simplification, eliminating a common hurdle toward including dendritic computations in network models. eLife Sciences Publications, Ltd 2021-01-26 /pmc/articles/PMC7837682/ /pubmed/33494860 http://dx.doi.org/10.7554/eLife.60936 Text en © 2021, Wybo et al http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Neuroscience
Wybo, Willem AM
Jordan, Jakob
Ellenberger, Benjamin
Marti Mengual, Ulisses
Nevian, Thomas
Senn, Walter
Data-driven reduction of dendritic morphologies with preserved dendro-somatic responses
title Data-driven reduction of dendritic morphologies with preserved dendro-somatic responses
title_full Data-driven reduction of dendritic morphologies with preserved dendro-somatic responses
title_fullStr Data-driven reduction of dendritic morphologies with preserved dendro-somatic responses
title_full_unstemmed Data-driven reduction of dendritic morphologies with preserved dendro-somatic responses
title_short Data-driven reduction of dendritic morphologies with preserved dendro-somatic responses
title_sort data-driven reduction of dendritic morphologies with preserved dendro-somatic responses
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7837682/
https://www.ncbi.nlm.nih.gov/pubmed/33494860
http://dx.doi.org/10.7554/eLife.60936
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