Data structures based on k-mers for querying large collections of sequencing data sets

High-throughput sequencing data sets are usually deposited in public repositories (e.g., the European Nucleotide Archive) to ensure reproducibility. As the amount of data has reached petabyte scale, repositories do not allow one to perform online sequence searches, yet, such a feature would be highl...

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Detalles Bibliográficos
Autores principales: Marchet, Camille, Boucher, Christina, Puglisi, Simon J., Medvedev, Paul, Salson, Mikaël, Chikhi, Rayan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory Press 2021
Materias:
Review
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7849385/
https://www.ncbi.nlm.nih.gov/pubmed/33328168
http://dx.doi.org/10.1101/gr.260604.119

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7849385/
https://www.ncbi.nlm.nih.gov/pubmed/33328168
http://dx.doi.org/10.1101/gr.260604.119

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