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Contamination detection in sequencing studies using the mitochondrial phylogeny

Within-species contamination is a major issue in sequencing studies, especially for mitochondrial studies. Contamination can be detected by analyzing the nuclear genome or by inspecting polymorphic sites in the mitochondrial genome (mtDNA). Existing methods using the nuclear genome are computational...

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Detalles Bibliográficos
Autores principales: Weissensteiner, Hansi, Forer, Lukas, Fendt, Liane, Kheirkhah, Azin, Salas, Antonio, Kronenberg, Florian, Schoenherr, Sebastian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7849411/
https://www.ncbi.nlm.nih.gov/pubmed/33452015
http://dx.doi.org/10.1101/gr.256545.119