Benchmarking microbial growth rate predictions from metagenomes

Growth rates are central to understanding microbial interactions and community dynamics. Metagenomic growth estimators have been developed, specifically codon usage bias (CUB) for maximum growth rates and “peak-to-trough ratio” (PTR) for in situ rates. Both were originally tested with pure cultures,...

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Detalles Bibliográficos
Autores principales: Long, Andrew M., Hou, Shengwei, Ignacio-Espinoza, J. Cesar, Fuhrman, Jed A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7852909/
https://www.ncbi.nlm.nih.gov/pubmed/32939027
http://dx.doi.org/10.1038/s41396-020-00773-1

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7852909/
https://www.ncbi.nlm.nih.gov/pubmed/32939027
http://dx.doi.org/10.1038/s41396-020-00773-1

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