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Benchmarking microbial growth rate predictions from metagenomes
Growth rates are central to understanding microbial interactions and community dynamics. Metagenomic growth estimators have been developed, specifically codon usage bias (CUB) for maximum growth rates and “peak-to-trough ratio” (PTR) for in situ rates. Both were originally tested with pure cultures,...
Autores principales: | Long, Andrew M., Hou, Shengwei, Ignacio-Espinoza, J. Cesar, Fuhrman, Jed A. |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7852909/ https://www.ncbi.nlm.nih.gov/pubmed/32939027 http://dx.doi.org/10.1038/s41396-020-00773-1 |
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