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Nonenzymatic polymerase-like template-directed synthesis of acyclic l-threoninol nucleic acid

Evolution of xeno nucleic acid (XNA) world essentially requires template-directed synthesis of XNA polymers. In this study, we demonstrate template-directed synthesis of an acyclic XNA, acyclic l-threoninol nucleic acid (l-aTNA), via chemical ligation mediated by N-cyanoimidazole. The ligation of an...

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Autores principales: Murayama, Keiji, Okita, Hikari, Kuriki, Takumi, Asanuma, Hiroyuki
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7864931/
https://www.ncbi.nlm.nih.gov/pubmed/33547322
http://dx.doi.org/10.1038/s41467-021-21128-0
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author Murayama, Keiji
Okita, Hikari
Kuriki, Takumi
Asanuma, Hiroyuki
author_facet Murayama, Keiji
Okita, Hikari
Kuriki, Takumi
Asanuma, Hiroyuki
author_sort Murayama, Keiji
collection PubMed
description Evolution of xeno nucleic acid (XNA) world essentially requires template-directed synthesis of XNA polymers. In this study, we demonstrate template-directed synthesis of an acyclic XNA, acyclic l-threoninol nucleic acid (l-aTNA), via chemical ligation mediated by N-cyanoimidazole. The ligation of an l-aTNA fragment on an l-aTNA template is significantly faster and occurs in considerably higher yield than DNA ligation. Both l-aTNA ligation on a DNA template and DNA ligation on an l-aTNA template are also observed. High efficiency ligation of trimer l-aTNA fragments to a template-bound primer is achieved. Furthermore, a pseudo primer extension reaction is demonstrated using a pool of random l-aTNA trimers as substrates. To the best of our knowledge, this is the first example of polymerase-like primer extension of XNA with all four nucleobases, generating phosphodiester bonding without any special modification. This technique paves the way for a genetic system of the l-aTNA world.
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spelling pubmed-78649312021-02-16 Nonenzymatic polymerase-like template-directed synthesis of acyclic l-threoninol nucleic acid Murayama, Keiji Okita, Hikari Kuriki, Takumi Asanuma, Hiroyuki Nat Commun Article Evolution of xeno nucleic acid (XNA) world essentially requires template-directed synthesis of XNA polymers. In this study, we demonstrate template-directed synthesis of an acyclic XNA, acyclic l-threoninol nucleic acid (l-aTNA), via chemical ligation mediated by N-cyanoimidazole. The ligation of an l-aTNA fragment on an l-aTNA template is significantly faster and occurs in considerably higher yield than DNA ligation. Both l-aTNA ligation on a DNA template and DNA ligation on an l-aTNA template are also observed. High efficiency ligation of trimer l-aTNA fragments to a template-bound primer is achieved. Furthermore, a pseudo primer extension reaction is demonstrated using a pool of random l-aTNA trimers as substrates. To the best of our knowledge, this is the first example of polymerase-like primer extension of XNA with all four nucleobases, generating phosphodiester bonding without any special modification. This technique paves the way for a genetic system of the l-aTNA world. Nature Publishing Group UK 2021-02-05 /pmc/articles/PMC7864931/ /pubmed/33547322 http://dx.doi.org/10.1038/s41467-021-21128-0 Text en © The Author(s) 2021 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Murayama, Keiji
Okita, Hikari
Kuriki, Takumi
Asanuma, Hiroyuki
Nonenzymatic polymerase-like template-directed synthesis of acyclic l-threoninol nucleic acid
title Nonenzymatic polymerase-like template-directed synthesis of acyclic l-threoninol nucleic acid
title_full Nonenzymatic polymerase-like template-directed synthesis of acyclic l-threoninol nucleic acid
title_fullStr Nonenzymatic polymerase-like template-directed synthesis of acyclic l-threoninol nucleic acid
title_full_unstemmed Nonenzymatic polymerase-like template-directed synthesis of acyclic l-threoninol nucleic acid
title_short Nonenzymatic polymerase-like template-directed synthesis of acyclic l-threoninol nucleic acid
title_sort nonenzymatic polymerase-like template-directed synthesis of acyclic l-threoninol nucleic acid
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7864931/
https://www.ncbi.nlm.nih.gov/pubmed/33547322
http://dx.doi.org/10.1038/s41467-021-21128-0
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