Cargando…
Charge-driven condensation of RNA and proteins suggests broad role of phase separation in cytoplasmic environments
Phase separation processes are increasingly being recognized as important organizing mechanisms of biological macromolecules in cellular environments. Well-established drivers of phase separation are multi-valency and intrinsic disorder. Here, we show that globular macromolecules may condense simply...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
eLife Sciences Publications, Ltd
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7877912/ https://www.ncbi.nlm.nih.gov/pubmed/33496264 http://dx.doi.org/10.7554/eLife.64004 |
_version_ | 1783650260009091072 |
---|---|
author | Dutagaci, Bercem Nawrocki, Grzegorz Goodluck, Joyce Ashkarran, Ali Akbar Hoogstraten, Charles G Lapidus, Lisa J Feig, Michael |
author_facet | Dutagaci, Bercem Nawrocki, Grzegorz Goodluck, Joyce Ashkarran, Ali Akbar Hoogstraten, Charles G Lapidus, Lisa J Feig, Michael |
author_sort | Dutagaci, Bercem |
collection | PubMed |
description | Phase separation processes are increasingly being recognized as important organizing mechanisms of biological macromolecules in cellular environments. Well-established drivers of phase separation are multi-valency and intrinsic disorder. Here, we show that globular macromolecules may condense simply based on electrostatic complementarity. More specifically, phase separation of mixtures between RNA and positively charged proteins is described from a combination of multiscale computer simulations with microscopy and spectroscopy experiments. Phase diagrams were mapped out as a function of molecular concentrations in experiment and as a function of molecular size and temperature via simulations. The resulting condensates were found to retain at least some degree of internal dynamics varying as a function of the molecular composition. The results suggest a more general principle for phase separation that is based primarily on electrostatic complementarity without invoking polymer properties as in most previous studies. Simulation results furthermore suggest that such phase separation may occur widely in heterogenous cellular environment between nucleic acid and protein components. |
format | Online Article Text |
id | pubmed-7877912 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | eLife Sciences Publications, Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-78779122021-02-16 Charge-driven condensation of RNA and proteins suggests broad role of phase separation in cytoplasmic environments Dutagaci, Bercem Nawrocki, Grzegorz Goodluck, Joyce Ashkarran, Ali Akbar Hoogstraten, Charles G Lapidus, Lisa J Feig, Michael eLife Physics of Living Systems Phase separation processes are increasingly being recognized as important organizing mechanisms of biological macromolecules in cellular environments. Well-established drivers of phase separation are multi-valency and intrinsic disorder. Here, we show that globular macromolecules may condense simply based on electrostatic complementarity. More specifically, phase separation of mixtures between RNA and positively charged proteins is described from a combination of multiscale computer simulations with microscopy and spectroscopy experiments. Phase diagrams were mapped out as a function of molecular concentrations in experiment and as a function of molecular size and temperature via simulations. The resulting condensates were found to retain at least some degree of internal dynamics varying as a function of the molecular composition. The results suggest a more general principle for phase separation that is based primarily on electrostatic complementarity without invoking polymer properties as in most previous studies. Simulation results furthermore suggest that such phase separation may occur widely in heterogenous cellular environment between nucleic acid and protein components. eLife Sciences Publications, Ltd 2021-01-26 /pmc/articles/PMC7877912/ /pubmed/33496264 http://dx.doi.org/10.7554/eLife.64004 Text en © 2021, Dutagaci et al http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited. |
spellingShingle | Physics of Living Systems Dutagaci, Bercem Nawrocki, Grzegorz Goodluck, Joyce Ashkarran, Ali Akbar Hoogstraten, Charles G Lapidus, Lisa J Feig, Michael Charge-driven condensation of RNA and proteins suggests broad role of phase separation in cytoplasmic environments |
title | Charge-driven condensation of RNA and proteins suggests broad role of phase separation in cytoplasmic environments |
title_full | Charge-driven condensation of RNA and proteins suggests broad role of phase separation in cytoplasmic environments |
title_fullStr | Charge-driven condensation of RNA and proteins suggests broad role of phase separation in cytoplasmic environments |
title_full_unstemmed | Charge-driven condensation of RNA and proteins suggests broad role of phase separation in cytoplasmic environments |
title_short | Charge-driven condensation of RNA and proteins suggests broad role of phase separation in cytoplasmic environments |
title_sort | charge-driven condensation of rna and proteins suggests broad role of phase separation in cytoplasmic environments |
topic | Physics of Living Systems |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7877912/ https://www.ncbi.nlm.nih.gov/pubmed/33496264 http://dx.doi.org/10.7554/eLife.64004 |
work_keys_str_mv | AT dutagacibercem chargedrivencondensationofrnaandproteinssuggestsbroadroleofphaseseparationincytoplasmicenvironments AT nawrockigrzegorz chargedrivencondensationofrnaandproteinssuggestsbroadroleofphaseseparationincytoplasmicenvironments AT goodluckjoyce chargedrivencondensationofrnaandproteinssuggestsbroadroleofphaseseparationincytoplasmicenvironments AT ashkarranaliakbar chargedrivencondensationofrnaandproteinssuggestsbroadroleofphaseseparationincytoplasmicenvironments AT hoogstratencharlesg chargedrivencondensationofrnaandproteinssuggestsbroadroleofphaseseparationincytoplasmicenvironments AT lapiduslisaj chargedrivencondensationofrnaandproteinssuggestsbroadroleofphaseseparationincytoplasmicenvironments AT feigmichael chargedrivencondensationofrnaandproteinssuggestsbroadroleofphaseseparationincytoplasmicenvironments |