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Charge-driven condensation of RNA and proteins suggests broad role of phase separation in cytoplasmic environments

Phase separation processes are increasingly being recognized as important organizing mechanisms of biological macromolecules in cellular environments. Well-established drivers of phase separation are multi-valency and intrinsic disorder. Here, we show that globular macromolecules may condense simply...

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Autores principales: Dutagaci, Bercem, Nawrocki, Grzegorz, Goodluck, Joyce, Ashkarran, Ali Akbar, Hoogstraten, Charles G, Lapidus, Lisa J, Feig, Michael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: eLife Sciences Publications, Ltd 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7877912/
https://www.ncbi.nlm.nih.gov/pubmed/33496264
http://dx.doi.org/10.7554/eLife.64004
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author Dutagaci, Bercem
Nawrocki, Grzegorz
Goodluck, Joyce
Ashkarran, Ali Akbar
Hoogstraten, Charles G
Lapidus, Lisa J
Feig, Michael
author_facet Dutagaci, Bercem
Nawrocki, Grzegorz
Goodluck, Joyce
Ashkarran, Ali Akbar
Hoogstraten, Charles G
Lapidus, Lisa J
Feig, Michael
author_sort Dutagaci, Bercem
collection PubMed
description Phase separation processes are increasingly being recognized as important organizing mechanisms of biological macromolecules in cellular environments. Well-established drivers of phase separation are multi-valency and intrinsic disorder. Here, we show that globular macromolecules may condense simply based on electrostatic complementarity. More specifically, phase separation of mixtures between RNA and positively charged proteins is described from a combination of multiscale computer simulations with microscopy and spectroscopy experiments. Phase diagrams were mapped out as a function of molecular concentrations in experiment and as a function of molecular size and temperature via simulations. The resulting condensates were found to retain at least some degree of internal dynamics varying as a function of the molecular composition. The results suggest a more general principle for phase separation that is based primarily on electrostatic complementarity without invoking polymer properties as in most previous studies. Simulation results furthermore suggest that such phase separation may occur widely in heterogenous cellular environment between nucleic acid and protein components.
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spelling pubmed-78779122021-02-16 Charge-driven condensation of RNA and proteins suggests broad role of phase separation in cytoplasmic environments Dutagaci, Bercem Nawrocki, Grzegorz Goodluck, Joyce Ashkarran, Ali Akbar Hoogstraten, Charles G Lapidus, Lisa J Feig, Michael eLife Physics of Living Systems Phase separation processes are increasingly being recognized as important organizing mechanisms of biological macromolecules in cellular environments. Well-established drivers of phase separation are multi-valency and intrinsic disorder. Here, we show that globular macromolecules may condense simply based on electrostatic complementarity. More specifically, phase separation of mixtures between RNA and positively charged proteins is described from a combination of multiscale computer simulations with microscopy and spectroscopy experiments. Phase diagrams were mapped out as a function of molecular concentrations in experiment and as a function of molecular size and temperature via simulations. The resulting condensates were found to retain at least some degree of internal dynamics varying as a function of the molecular composition. The results suggest a more general principle for phase separation that is based primarily on electrostatic complementarity without invoking polymer properties as in most previous studies. Simulation results furthermore suggest that such phase separation may occur widely in heterogenous cellular environment between nucleic acid and protein components. eLife Sciences Publications, Ltd 2021-01-26 /pmc/articles/PMC7877912/ /pubmed/33496264 http://dx.doi.org/10.7554/eLife.64004 Text en © 2021, Dutagaci et al http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Physics of Living Systems
Dutagaci, Bercem
Nawrocki, Grzegorz
Goodluck, Joyce
Ashkarran, Ali Akbar
Hoogstraten, Charles G
Lapidus, Lisa J
Feig, Michael
Charge-driven condensation of RNA and proteins suggests broad role of phase separation in cytoplasmic environments
title Charge-driven condensation of RNA and proteins suggests broad role of phase separation in cytoplasmic environments
title_full Charge-driven condensation of RNA and proteins suggests broad role of phase separation in cytoplasmic environments
title_fullStr Charge-driven condensation of RNA and proteins suggests broad role of phase separation in cytoplasmic environments
title_full_unstemmed Charge-driven condensation of RNA and proteins suggests broad role of phase separation in cytoplasmic environments
title_short Charge-driven condensation of RNA and proteins suggests broad role of phase separation in cytoplasmic environments
title_sort charge-driven condensation of rna and proteins suggests broad role of phase separation in cytoplasmic environments
topic Physics of Living Systems
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7877912/
https://www.ncbi.nlm.nih.gov/pubmed/33496264
http://dx.doi.org/10.7554/eLife.64004
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