Cargando…

Prebiotically Plausible RNA Activation Compatible with Ribozyme‐Catalyzed Ligation

RNA‐catalyzed RNA ligation is widely believed to be a key reaction for primordial biology. However, since typical chemical routes towards activating RNA substrates are incompatible with ribozyme catalysis, it remains unclear how prebiotic systems generated and sustained pools of activated building b...

Descripción completa

Detalles Bibliográficos
Autores principales: Song, Emilie Yeonwha, Jiménez, Eddy Ivanhoe, Lin, Huacan, Le Vay, Kristian, Krishnamurthy, Ramanarayanan, Mutschler, Hannes
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7898671/
https://www.ncbi.nlm.nih.gov/pubmed/33128282
http://dx.doi.org/10.1002/anie.202010918
_version_ 1783653912228659200
author Song, Emilie Yeonwha
Jiménez, Eddy Ivanhoe
Lin, Huacan
Le Vay, Kristian
Krishnamurthy, Ramanarayanan
Mutschler, Hannes
author_facet Song, Emilie Yeonwha
Jiménez, Eddy Ivanhoe
Lin, Huacan
Le Vay, Kristian
Krishnamurthy, Ramanarayanan
Mutschler, Hannes
author_sort Song, Emilie Yeonwha
collection PubMed
description RNA‐catalyzed RNA ligation is widely believed to be a key reaction for primordial biology. However, since typical chemical routes towards activating RNA substrates are incompatible with ribozyme catalysis, it remains unclear how prebiotic systems generated and sustained pools of activated building blocks needed to form increasingly larger and complex RNA. Herein, we demonstrate in situ activation of RNA substrates under reaction conditions amenable to catalysis by the hairpin ribozyme. We found that diamidophosphate (DAP) and imidazole drive the formation of 2′,3′‐cyclic phosphate RNA mono‐ and oligonucleotides from monophosphorylated precursors in frozen water‐ice. This long‐lived activation enables iterative enzymatic assembly of long RNAs. Our results provide a plausible scenario for the generation of higher‐energy substrates required to fuel ribozyme‐catalyzed RNA synthesis in the absence of a highly evolved metabolism.
format Online
Article
Text
id pubmed-7898671
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-78986712021-03-03 Prebiotically Plausible RNA Activation Compatible with Ribozyme‐Catalyzed Ligation Song, Emilie Yeonwha Jiménez, Eddy Ivanhoe Lin, Huacan Le Vay, Kristian Krishnamurthy, Ramanarayanan Mutschler, Hannes Angew Chem Int Ed Engl Communications RNA‐catalyzed RNA ligation is widely believed to be a key reaction for primordial biology. However, since typical chemical routes towards activating RNA substrates are incompatible with ribozyme catalysis, it remains unclear how prebiotic systems generated and sustained pools of activated building blocks needed to form increasingly larger and complex RNA. Herein, we demonstrate in situ activation of RNA substrates under reaction conditions amenable to catalysis by the hairpin ribozyme. We found that diamidophosphate (DAP) and imidazole drive the formation of 2′,3′‐cyclic phosphate RNA mono‐ and oligonucleotides from monophosphorylated precursors in frozen water‐ice. This long‐lived activation enables iterative enzymatic assembly of long RNAs. Our results provide a plausible scenario for the generation of higher‐energy substrates required to fuel ribozyme‐catalyzed RNA synthesis in the absence of a highly evolved metabolism. John Wiley and Sons Inc. 2020-12-10 2021-02-08 /pmc/articles/PMC7898671/ /pubmed/33128282 http://dx.doi.org/10.1002/anie.202010918 Text en © 2020 The Authors. Angewandte Chemie International Edition published by Wiley-VCH GmbH This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Communications
Song, Emilie Yeonwha
Jiménez, Eddy Ivanhoe
Lin, Huacan
Le Vay, Kristian
Krishnamurthy, Ramanarayanan
Mutschler, Hannes
Prebiotically Plausible RNA Activation Compatible with Ribozyme‐Catalyzed Ligation
title Prebiotically Plausible RNA Activation Compatible with Ribozyme‐Catalyzed Ligation
title_full Prebiotically Plausible RNA Activation Compatible with Ribozyme‐Catalyzed Ligation
title_fullStr Prebiotically Plausible RNA Activation Compatible with Ribozyme‐Catalyzed Ligation
title_full_unstemmed Prebiotically Plausible RNA Activation Compatible with Ribozyme‐Catalyzed Ligation
title_short Prebiotically Plausible RNA Activation Compatible with Ribozyme‐Catalyzed Ligation
title_sort prebiotically plausible rna activation compatible with ribozyme‐catalyzed ligation
topic Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7898671/
https://www.ncbi.nlm.nih.gov/pubmed/33128282
http://dx.doi.org/10.1002/anie.202010918
work_keys_str_mv AT songemilieyeonwha prebioticallyplausiblernaactivationcompatiblewithribozymecatalyzedligation
AT jimenezeddyivanhoe prebioticallyplausiblernaactivationcompatiblewithribozymecatalyzedligation
AT linhuacan prebioticallyplausiblernaactivationcompatiblewithribozymecatalyzedligation
AT levaykristian prebioticallyplausiblernaactivationcompatiblewithribozymecatalyzedligation
AT krishnamurthyramanarayanan prebioticallyplausiblernaactivationcompatiblewithribozymecatalyzedligation
AT mutschlerhannes prebioticallyplausiblernaactivationcompatiblewithribozymecatalyzedligation