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RING domains act as both substrate and enzyme in a catalytic arrangement to drive self-anchored ubiquitination

Attachment of ubiquitin (Ub) to proteins is one of the most abundant and versatile of all posttranslational modifications and affects outcomes in essentially all physiological processes. RING E3 ligases target E2 Ub-conjugating enzymes to the substrate, resulting in its ubiquitination. However, the...

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Autores principales: Kiss, Leo, Clift, Dean, Renner, Nadine, Neuhaus, David, James, Leo C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7900206/
https://www.ncbi.nlm.nih.gov/pubmed/33619271
http://dx.doi.org/10.1038/s41467-021-21443-6
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author Kiss, Leo
Clift, Dean
Renner, Nadine
Neuhaus, David
James, Leo C.
author_facet Kiss, Leo
Clift, Dean
Renner, Nadine
Neuhaus, David
James, Leo C.
author_sort Kiss, Leo
collection PubMed
description Attachment of ubiquitin (Ub) to proteins is one of the most abundant and versatile of all posttranslational modifications and affects outcomes in essentially all physiological processes. RING E3 ligases target E2 Ub-conjugating enzymes to the substrate, resulting in its ubiquitination. However, the mechanism by which a ubiquitin chain is formed on the substrate remains elusive. Here we demonstrate how substrate binding can induce a specific RING topology that enables self-ubiquitination. By analyzing a catalytically trapped structure showing the initiation of TRIM21 RING-anchored ubiquitin chain elongation, and in combination with a kinetic study, we illuminate the chemical mechanism of ubiquitin conjugation. Moreover, biochemical and cellular experiments show that the topology found in the structure can be induced by substrate binding. Our results provide insights into ubiquitin chain formation on a structural, biochemical and cellular level with broad implications for targeted protein degradation.
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spelling pubmed-79002062021-03-05 RING domains act as both substrate and enzyme in a catalytic arrangement to drive self-anchored ubiquitination Kiss, Leo Clift, Dean Renner, Nadine Neuhaus, David James, Leo C. Nat Commun Article Attachment of ubiquitin (Ub) to proteins is one of the most abundant and versatile of all posttranslational modifications and affects outcomes in essentially all physiological processes. RING E3 ligases target E2 Ub-conjugating enzymes to the substrate, resulting in its ubiquitination. However, the mechanism by which a ubiquitin chain is formed on the substrate remains elusive. Here we demonstrate how substrate binding can induce a specific RING topology that enables self-ubiquitination. By analyzing a catalytically trapped structure showing the initiation of TRIM21 RING-anchored ubiquitin chain elongation, and in combination with a kinetic study, we illuminate the chemical mechanism of ubiquitin conjugation. Moreover, biochemical and cellular experiments show that the topology found in the structure can be induced by substrate binding. Our results provide insights into ubiquitin chain formation on a structural, biochemical and cellular level with broad implications for targeted protein degradation. Nature Publishing Group UK 2021-02-22 /pmc/articles/PMC7900206/ /pubmed/33619271 http://dx.doi.org/10.1038/s41467-021-21443-6 Text en © The Author(s) 2021 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Kiss, Leo
Clift, Dean
Renner, Nadine
Neuhaus, David
James, Leo C.
RING domains act as both substrate and enzyme in a catalytic arrangement to drive self-anchored ubiquitination
title RING domains act as both substrate and enzyme in a catalytic arrangement to drive self-anchored ubiquitination
title_full RING domains act as both substrate and enzyme in a catalytic arrangement to drive self-anchored ubiquitination
title_fullStr RING domains act as both substrate and enzyme in a catalytic arrangement to drive self-anchored ubiquitination
title_full_unstemmed RING domains act as both substrate and enzyme in a catalytic arrangement to drive self-anchored ubiquitination
title_short RING domains act as both substrate and enzyme in a catalytic arrangement to drive self-anchored ubiquitination
title_sort ring domains act as both substrate and enzyme in a catalytic arrangement to drive self-anchored ubiquitination
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7900206/
https://www.ncbi.nlm.nih.gov/pubmed/33619271
http://dx.doi.org/10.1038/s41467-021-21443-6
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